Salvelinus sp. IW2-2015 (Arctic char): 111976939
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Entry
111976939 CDS
T05762
Name
(RefSeq) PR domain zinc finger protein 16-like isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00310
Lysine degradation
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
111976939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111976939
03036 Chromosome and associated proteins [BR:
salp03036
]
111976939
Enzymes [BR:
salp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
111976939
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
111976939
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
111976939
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_6
zf-C2H2_jaz
zf-H2C2_5
SET
zf-BED
C2CH-3rd_BIRD-IDD
zf-C2H2_11
New_glue
Motif
Other DBs
NCBI-GeneID:
111976939
NCBI-ProteinID:
XP_023861885
LinkDB
All DBs
Position
LG17:35682523..36087514
Genome browser
AA seq
1385 aa
AA seq
DB search
MRSKARARKLAKTDIEPVDSMHETEAHLLAGGGESGEEETEDSIMSPISVGPLSPHPNNH
HHHPSHHHHHEIPFTPKEGSPYEVPVYIPGDIPVPSDLELRESSVPGAGLGIWAKTRIGM
GEHFGPHSALQGATVKDSSFGWEQMLNDHEVMSSPDSCIKKVVDEMGNVKFCLDEGSEPG
GTWLKYVRTAISFEEQNMAACHLSGDQIDYKAIRDIEVGEELLVYMKEGIFPEGSMAPNL
EDEQMYRCEDCDELFTSALELQRHQKCFCSSAGSLFDTLSNEDFKQDCDDSNHESVHECK
DCEKIFPDEYSLGQHMIVHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKHFECENCDK
VQHTRHVFTDPSNLQRHIRSQHIGARTHTCPECGKTFATSSGLKQHKHIHSSVKPFICEV
CHKSYTQFSNLCRHKRMHADCRTQVKCKDCGQMFSTTSSLNKHRRFCEGKNHYGPAGGLF
APGIPMSSPILAKSRSHPHHHQPGLNHSGLAFPDYFPSRPHLHASLSFSPGPHGFPSLSH
GFPGLFVPSFYPRPHLLPPSPFLKSPLGKNSNNGGSQEGKLPHSPLDGTPLSLISSINNN
NGGNSLLSSQEREDKERLELAYREVKAKAKMSEVSDGSDLEEVNTTSGTDLDTTTGTASC
SELDSDTESEREQRERIRSTKRRKEAGVRGVVGTDRVGQDGRPDNVSSGSVSAVSSSVNL
ACEQPSFLSVASQHSFFPHPDEQALPPTGATAATDSIKAIASIAEKYFGPALMGLQEKNI
GSLPCHSMFPFKFLPNFPHSLYPFNKQAGALNPGMFFKAEPKSPRAQHPPPNKMAAPRTG
EPSPFDLTTKPKKAKSKLPAPAKSTPSSGSSNTPLILPGDEEQPLDLSIGSHRRDVHNGV
LAPEQPSSHKNQRKEEHPGSHPHQHTQHPQGHPLHQPLLSQHQQPLAQPPQQQPSLHYTK
PSPFFMDPIYSRVEKRKLLDPVGALKEKFLRANSLLFHPQMSAMESMTEKLESFGALKLD
APPNLLQHSARPLFNFRSPPPSLSDSILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGE
QPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFRCHLCNRCFGQQTNLDRHLKKHEQENLP
VSEHSGILSNLGNNVSSPNSEPDHLLDEKEDSYFSEIRNFISNSEMNQASSSTDKRSELA
EEERLSSHGLSSSRGLEEEEGVDEEEVEGSLTEKSQYEAPXSPSPVSMVTPGAYEDEEEE
EAEEEEEATPLAISYEHTRRCIEEDGGLLDLEALPSFPNGLDLHKANSGEEPPFDVKVIF
NTASLESEALKETLYRHAKTQAYAMMLSLSENSPLHASSQNSLDAWLSMGRGPSETSSFY
PLCHI
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggctagggcaagaaaactggccaaaactgacattgagccagttgacagc
atgcacgagacagaggcccacctcctggcgggagggggtgagagtggggaggaggagacc
gaggatagcatcatgtcccccatctccgtaggacccctgtccccgcaccccaacaaccac
caccaccatcccagccaccatcatcaccacgagatccccttcacgcccaaggaaggctcg
ccctacgaggtgcccgtctacattcccggcgacattcccgtccccagcgacctggagctg
cgcgagtcctcggttcccggagcgggcctggggatatgggccaaaacccggatcgggatg
ggagagcactttggacctcacagcgcactgcagggcgccacggtcaaagacagctccttc
ggatgggagcagatgctgaatgaccacgaggtgatgtcctctccggatagctgcatcaaa
aaggtggtggatgagatgggcaacgtcaagttctgtctggacgaaggctcagagcccggt
gggacctggctcaagtatgtacgcactgccatctcctttgaggagcagaacatggcggcg
tgtcacctcagcggagaccagattgattataaagctattagggatattgaagtgggggaa
gagctattggtgtatatgaaggaaggaattttccccgagggatcgatggcaccaaaccta
gaagacgaacagatgtaccgctgcgaggactgtgacgagctgttcacctcagccctggag
ctgcagcggcaccagaagtgcttttgttccagcgccgggtccttgttcgacactctcagc
aacgaggacttcaagcaggactgtgacgacagcaaccacgagtctgtccacgagtgcaag
gactgcgagaagatcttccccgacgagtacagtctgggccaacacatgattgtgcacaca
gaggagcgagagtacaagtgtgaccagtgtcccaaggccttcaactggaagtccaacctc
atccgccaccagatgtcccacgacagcggcaagcactttgagtgtgaaaactgcgataag
gtacagcacacccggcatgtgttcacagaccccagcaacctgcagcgccacatccgctcg
cagcacataggggcgcgcactcacacctgccccgagtgtggaaagaccttcgccacctcc
tcgggcctcaagcagcacaagcacattcacagtagtgtcaagcccttcatctgcgaggtg
tgccacaagtcctacacgcagttctccaacctgtgccgccacaagcgcatgcacgccgac
tgccgcacccaggtcaagtgcaaagactgtggccagatgttcagcactacttcctccctc
aacaagcaccggcgcttttgtgagggcaagaaccattacggccctgccgggggcctgttt
gctcccggcatccccatgagcagccccatcctggccaagtccaggtcccatccccaccac
caccaaccgggactcaaccactcaggtctggccttccctgactacttcccctcccggccc
catcttcacgccagcctatccttctcccccgggccgcatggttttccctcgctctcccat
ggcttcccgggtctcttcgtcccctcgttctacccccgaccgcacttactgccccccagc
ccatttctgaagagccccctgggcaagaacagtaacaacggtgggagccaggagggcaag
ctgcctcacagccccctggacggaactccactgtctctgatcagctccatcaacaacaac
aacggaggaaatagtctcctcagcagtcaggagagggaggacaaagagaggctggagctg
gcgtacagagaagtcaaggccaaagccaagatgtcggaggtgtcggacggcagcgacctg
gaggaagtcaacaccaccagcggcaccgatctggacaccaccaccggcaccgcttcgtgt
tcagagttagacagcgacactgagagtgagcgggaacaacgggagcggatcaggagcaca
aagagaaggaaggaggcaggtgttagaggggtggtggggacagatagggtgggtcaggat
gggcggccggacaacgtgagcagcggctcagtgtcggcggtgtccagctcggtcaacctg
gcttgcgagcagccctccttcctctcggtcgcctcccagcactccttctttccgcatccg
gacgagcaggcgctgccccccacaggggccaccgctgccaccgactccatcaaggccatc
gcttccatcgccgagaagtactttggccctgcgctcatgggcctgcaagagaagaatata
ggctcactgccctgccattccatgttccctttcaagttcctacccaacttccctcactcc
ctctaccccttcaacaagcaggccggtgccctcaaccccggcatgttcttcaaggctgag
cccaagtcgcctcgtgcgcaacatccgccacccaacaagatggctgcccctcgcactgga
gagccatcgcccttcgacctcaccaccaagccaaagaaggccaagtcgaaactgccggcc
cccgctaagtcgaccccatccagcggtagcagcaacacccccctcattctcccgggggat
gaggagcagccactggacctcagcatcggcagccacagacgggatgtgcacaacggggtg
ctggcccctgagcagccgtccagccacaagaaccaacgcaaggaggagcaccccggcagc
cacccgcaccaacacacccagcacccccagggccaccccctccaccagcccctgctgtca
cagcaccagcagcccctggcccagccgccccagcagcagccctccctgcattacaccaag
ccctcgcccttcttcatggacccaatatacagcagggtggagaagaggaagttactggac
cctgtaggagctttgaaggagaagttcctgagggccaattcgcttctcttccatccacag
atgtcagccatggagagcatgacggagaagctggagagctttggcgctctcaaactggat
gccccgcccaacttgctgcagcactcggcccgcccactcttcaacttccgctctccgcca
ccctccctctccgactccatcctccgcaaaggcaaggagcgctacacctgcaggtactgt
gggaagatcttccccaggtcagctaatcttaccaggcacttacggacacacacaggggag
cagccctacaggtgtaaatactgtgaccgctcgttcagcatctcctccaacctccagcgg
cacgtacgcaacatccacaacaaggagaagcccttcaggtgtcacctgtgcaaccgctgt
ttcggccagcagaccaacttggaccgccacctgaagaagcacgagcaggagaacctgccc
gtgagtgaacactctgggatcctctccaacctaggaaacaacgtttcctctcccaactcc
gagccagatcaccttttagatgagaaagaggactcttacttctcggaaatccgcaacttc
atttccaacagcgagatgaaccaggcatccagctccacagacaagaggtcagaacttgcg
gaggaggagcgtctgtcgagccacggcctgtccagctcccgggggctagaggaggaggag
ggagtcgatgaagaggaggtagaaggcagcctgacggagaaatctcagtacgaagcgccc
raatccccctccccggtcagcatggtcacaccgggggcgtacgaagacgaagaggaggag
gaagcggaggaagaggaggaagccacaccgttggctataagctacgaacacacccgcagg
tgtatagaggaggacggtgggctgttagacctggaggccctacccagcttccccaacggt
ctggacctgcataaggccaacagcggcgaggagcccccctttgatgttaaagtcattttt
aacaccgcctcactcgagtcagaagccctgaaagagactctgtacagacatgctaaaact
caggcttatgcaatgatgctgtctctgtcggagaacagccctttgcacgcgtcctcccag
aactcactggatgcctggctgagcatgggaaggggcccgtctgagacgagcagcttttac
ccactctgccacatctaa
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