Salvelinus sp. IW2-2015 (Arctic char): 111976940
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Entry
111976940 CDS
T05762
Symbol
wdr46
Name
(RefSeq) WD repeat-containing protein 46
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
salp03009
]
111976940 (wdr46)
Ribosome biogenesis [BR:
salp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111976940 (wdr46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
EIF3I
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
B-prop_COPA_B_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
111976940
NCBI-ProteinID:
XP_023861889
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Position
LG17:8266726..8274837
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AA seq
623 aa
AA seq
DB search
MAASNETMLKKPHVGKKRKPPTRYWEGTEKDGKNDGKKQKEGDNNEQTPQQNKTRTKEGG
KRGVAGGKQGVAGGKRGVAGGKRGVAGGKRGKRGGAGEKVISGKLDPFPGSALVPEEKLK
KFKRGVKGELPPRPQYKLRDVVIRSEAASDLAQKQNARYDLMLPEDAGFLEGDKDEDTCN
ISQDDIADAVDITAGAKYFSLTLSQFGPYRLDYSKTGRHLLLGGRRGHVTCLDWQSKQLM
CEMNVMETVNDVKWLHSEALFAVAQKKWLYIYDNKGIELHCIRKFNDVLRMQFLPYHFLL
ATASATGFLQYLDVSVGKEVVAICTKAGRLDVMAHNPHNGIIHLGHSNGTVTLWTPNQRE
PVVKMLCHQGGVRSVAVDKTGTYMVTSGMDKKLKVYDIRSYRPLQSYFLPAGASCLSLSQ
RGLLSAATGDIVQVYRDVWGTPVTKPYMAHRAKGSVWGVHFCPFEDVLGVGHGEGFTSMV
VPGAGEPNFDGLDANPYRSAKQRQEWEVKALLEKIQPELIGLDPSQLSQVDHSTWEQRHE
DRVQVLGFDPLAKEKFTPRLKTKGRSSSGKVEKRKKQVAHEDQRDVIRQTVEDRMKIDKE
RKEKEKKEAAAAGQKSALDRFRK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccaacgagacaatgttgaaaaaaccacacgtggggaaaaagagaaagcct
ccaacgagatactgggagggcacagagaaagacgggaagaatgatggaaagaaacagaaa
gaaggggacaacaacgaacagactccgcaacaaaataagacgaggacaaaggaaggagga
aagcgaggagtagcaggaggaaagcaaggagtagcaggaggaaagcgaggagtagcagga
ggaaagcgaggagtagcaggaggaaagcgaggaaagcgaggaggagcaggagaaaaggtc
atatcagggaaattagatccattcccaggctcagcacttgtccctgaagagaagttgaaa
aaattcaagaggggagtgaagggagaactgccccctcggccgcagtacaagctcagagat
gtggtcattcgatcagaggctgcctcagacctggcccagaagcagaatgcacgatatgac
cttatgctcccagaggatgctgggttcctggagggagacaaagatgaggacacgtgcaac
atctcacaggatgacatcgctgatgctgtggatattaccgcaggggcaaagtactttagc
ctgaccctgtctcagtttgggccttaccgactggattacagcaagactgggcgacacctg
ctgcttggtggcaggagagggcacgtgacctgcctggactggcagtccaaacagttgatg
tgtgagatgaacgtgatggagacagtcaacgatgtaaagtggctccacagtgaggctttg
tttgcagtggctcagaagaagtggctgtatatctatgacaacaagggcatcgagctccac
tgcatccgcaagttcaacgatgttctccgcatgcagtttctcccctaccacttcctgctg
gctacagcaagtgcgacaggcttcctgcagtacctggatgtgtcagtgggtaaggaggtg
gtggccatctgcaccaaggctggccggcttgatgtgatggcccataaccctcacaacggc
atcatccacctgggccactccaacggcactgtcaccctctggacgccaaaccagagagag
ccagttgtcaagatgctctgccaccagggaggtgtgcgctctgtcgccgtcgacaagact
ggcacgtacatggtgacctctggcatggacaagaagctgaaggtgtatgacatcagatcc
taccggcccctgcagtcctacttcctgcctgcgggagcttcctgcctatctctgagtcag
aggggcctgctgtccgccgccacaggagacatagtccaggtgtacagagatgtgtggggc
accccagtgaccaagccctacatggcccacagggcaaagggctcagtgtggggtgtgcac
ttctgcccctttgaggacgtcctaggggtgggccatggagagggcttcactagcatggtc
gtaccaggtgctggcgagcccaactttgacggtctggatgccaacccgtaccgcagtgcc
aagcagaggcaggagtgggaggtcaaagccctactagagaagatccagccagaactgatt
ggcctggaccctagccagctcagccaggtggaccactccacctgggaacagagacatgag
gacagggtccaagtactgggctttgacccgctggccaaggagaagtttacaccaaggtta
aagaccaaaggtcggagttcaagtggaaaagtggaaaagcgcaagaagcaagtggcacat
gaggaccagagggatgtgatcaggcaaaccgtggaagacaggatgaagatagataaagag
aggaaggagaaagagaagaaagaggcggcagcagctggtcagaagtctgctctggacaga
ttcaggaagtaa
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