Salvelinus sp. IW2-2015 (Arctic char): 111976943
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Entry
111976943 CDS
T05762
Name
(RefSeq) TBC1 domain family member 25 isoform X1
KO
K24799
TBC1 domain family member 25
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111976943
Membrane trafficking [BR:
salp04131
]
Others
Specific organelles associated proteins
Auto phagosome
111976943
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
UFL1_C
Motif
Other DBs
NCBI-GeneID:
111976943
NCBI-ProteinID:
XP_023861893
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All DBs
Position
LG17:15793412..15804908
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AA seq
909 aa
AA seq
DB search
MATDEERGVVRVKVKKCEGMLPVEFRSFAVDPQITSLEVLQHILIRAFELNGKRNFGISY
LSRDRGGLEVYLSLLSDWDLDAAFVSAAKPYLQLKMDIKPAEDSPVMEDWDIISPKEVIC
SDQLPGDRRSLAAAALPFTQSLLSQVTDNALALHPVSHLFYQPVTAALSQMMGRTLSRVQ
QALSWSYGEEVKPFKPPLSDAEFHSYLNGQGQLSRPEELRLRIYHGGVEPSLRKVVWRYL
LNVYPDGLTGQERMDYMKRKTREYDQLKGEWSARVSPEDLEFIRGNVLKDVLRTDRAHPY
YAGSEDSPHLTALTDLLTTFAITHPQVSYCQGMSDIASPILAVMDNEAHAFICFCGIMKR
LEGNFRPDGQLMSVKFQHLKLLLQYSDPEFYCYLVSRGADDLFFCYRWLLLELKREFAFD
DALRMLEVTWSSLPPDPPETEVELFGPPLETDQTRMTSESGVEKRPAFAGEEEGEQKEKQ
RRRHMLRPSREEADGGRKIDMEEGEREDRGARREGEGNFDMPYVGEEKAHNNAPVPPFEK
QTSFGEFKYYNARNKDSFDFVERDPPEGPVEMEASLHPVSSPPARQGTEDSEEDPGERAP
LITDDDKSSSPETEERSSPNGQTASPVSPFPHGLPSWKNGSSLSPGSTPSPSSWRGASPD
TPSPKYTSPILPNGRVESPEKATRGFASFASVPNGTGANSPATPTGRSLVSSPLLTRSLL
SSPILSFGRALPSLPVSTVNKSFPSNLPSPCSRASSTAPNTPNSTKPENTTIKPCSLPPP
QEFGKGNPFMLFLCLSILLEHRDHIIKNSFDYNELAMHFDRLVRRHNLGRVLQRAKALFA
DYLQSEVWDSEEGDEVSSDSPTTVTAAFHSPPPSATRPLFTPLSSSPNSTYNLADTIPAP
SPVSLSPSS
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgatgaggagaggggcgtagtgcgtgtcaaagtaaagaagtgtgaggggatg
ctgccagtggagtttcgctcatttgctgtggatcctcagataacatcacttgaggtgcta
cagcacatcctcatccgagcctttgagttaaatggcaaacgcaactttggaataagttac
ctatcccgggaccgtggaggtttggaagtgtatctttcgctcctgtctgactgggattta
gatgctgcatttgtcagtgcagctaaaccttatctacagctcaagatggacattaagcct
gccgaagacagtcccgttatggaagactgggacataataagccccaaagaagtgatttgt
tctgaccagcttcccggggataggaggtccttggcggctgcggccctccccttcacccag
tccctactgtcccaggttactgacaacgctctcgctcttcaccctgtcagccatcttttt
taccagccagtcactgctgccttgagtcagatgatgggtcgaacactgtccagagtacaa
caggccttgagctggtcttacggggaggaggtgaagcctttcaagccccctttgagcgat
gcggagttccacagttacctcaacggccagggccagctttcccgaccagaggaactgagg
ctacgcatctatcatggtggggtagagccttcactacgcaaggttgtgtggcgttacctc
ctgaacgtgtaccccgatgggctgaccggtcaggagaggatggactacatgaagagaaag
actagggagtacgaccagctaaagggggagtggtcagctagggtcagtccagaggacctg
gagttcatcaggggcaacgtactgaaggacgtcctgaggaccgaccgggcccatccctat
tacgccggctccgaggacagcccccacctcaccgctctcaccgacctgcttaccaccttt
gccattacacatccacaggtgtcgtactgccaaggcatgagtgacatcgcttctccgata
cttgccgttatggacaatgaggcacatgcattcatctgtttctgtggcatcatgaaacgc
ctagagggcaatttccgcccggatggccaactcatgtccgtcaagttccagcatctgaag
ctgctactgcagtactcagaccccgagttctactgttatttggtgtcccgcggagctgat
gacctgttcttctgttaccgctggctgctcttggaactcaaacgggagtttgccttcgac
gatgccctgaggatgctggaggtcacctggagctccctgcctcctgatcctcccgaaacg
gaagtggagctttttgggccgcccctagagacagaccagaccagaatgacatctgagagt
ggtgttgaaaagaggcctgctttcgcaggtgaagaagaaggggagcagaaagagaagcag
cggcgacgacacatgttgaggccttcaagagaggaggcagacggcgggagaaagatcgac
atggaggaaggagagcgggaggacagaggagccagaagagagggtgaggggaacttcgac
atgccttacgtaggagaggagaaggcgcacaacaatgcacctgttcctccctttgagaag
cagaccagttttggtgagttcaaatactacaatgcacggaacaaggacagctttgatttc
gtggagagagacccaccagagggtcctgttgagatggaagcctccttgcaccctgtatca
agtccaccggcccggcagggcaccgaggacagcgaggaggatccaggggagagagcacct
cttataacggatgatgacaagtcctccagcccagagacggaggagaggagctcccctaat
ggacaaacagcatctccggtctccccatttcctcatggtctgccaagctggaagaatggt
tcctctttgtctccaggctccactccctccccctcaagttggagaggtgcctccccagac
accccgtcaccaaagtacacctcccccattttacccaacggaagggttgagtcgccagag
aaagccacaagaggatttgcttcctttgcctcggtgccgaacggaaccggagctaactct
cccgctaccccaacagggaggtccttggtttcctctcccctactgactagatcattgctc
tcctcccctattttgtccttcgggagagctcttccttcgctgccggtcagcacagtcaac
aagtcctttcccagtaacctcccttctccttgcagcagagcctccagcactgcgcccaac
actccaaattcaaccaaaccagagaataccaccatcaaaccttgttccctgccaccgcct
caagagtttggtaaagggaatcctttcatgttgttcctttgcctgtcaatcctgttggag
catcgagaccacattataaagaacagctttgattacaacgagctggctatgcactttgac
cgccttgttcggcgacacaatctgggcagggtgctgcagcgcgccaaggccttgtttgcg
gactacctgcagagtgaggtgtgggattcagaggaaggggatgaggtcagctcggactcg
cccaccacagtcactgctgctttccactccccgcccccctctgccaccaggcctcttttt
acccctttgtcatcctctcccaactccacctataatctggctgataccatacctgcccct
tcacctgtctccctctctccctcctcttga
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