Salvelinus sp. IW2-2015 (Arctic char): 111976953
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Entry
111976953 CDS
T05762
Symbol
nrap
Name
(RefSeq) LOW QUALITY PROTEIN: nebulin-related-anchoring protein
KO
K24421
nebulin-related-anchoring protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111976953 (nrap)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111976953 (nrap)
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
LIM domain-containing proteins
LASP family proteins
111976953 (nrap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nebulin
LIM
DUF6634
Motif
Other DBs
NCBI-GeneID:
111976953
NCBI-ProteinID:
XP_023861910
LinkDB
All DBs
Position
LG17:39747302..39863225
Genome browser
AA seq
1765 aa
AA seq
DB search
MQSCARCGFVVYPAEKINCIDQNWHKACFHCDVCKMVLTAKNFVSHKKRPYCSVHNPRNN
MFTSVYETPINAKKQAIASSEQHYQAKFEEQQTYSYSGTITNQEIVSVSQAQKTISDVKY
TEEYEQSKGKGSLSTMITPGCQMSKKANTLHSSVEYNKGEEKESKYTSVAKTPEVLLAES
QGQIKYVYTEEYEQQLGKGSFPAHLTPGYQVSKKATEMASGVKYRQMYEQEMKGKATSDA
GAAEFAFARENAGNFSQIAYTEEYEQQRGKGSFPAMITPAYQLAKKAQAHASDLKYKKDL
NKMKGSSHFHNLTSEDNLALKSARKINKIVSEVEYKKDLENTKGHSINYCETPQYKNASK
AAKFSSDNKYKEKYTNHMKGHYEGSEMDKNAVHAMNVRKLASNIAYKQEYEQEKTDHVEY
NYPATITPGYQSQRKLDPLKDKNYRQHIDQVKYSSVTDTPDIVQARINAQQLSNKNYRQH
IDQVKYSSVTDTPQIVQARINAQQLSNIKYKEDWXKTKSKTCDIGLDTLTVKAAKASRDL
ASDIKYKESFMKNKDKTSNVSDSKTLHSLQASKMTSEIEYKKNSKENQSHFSLSMDMVNL
SHAKKAQSLASDLDYRTKLHHYTILSDDIQVQQAKKAYNLQSENQYRSDLTWMKGVGWEA
DGCLNVTQAKKAGELLSDKKYRQKADNVKFTQVADTPSIKHAKKSQELQSKLTYKAGKEQ
MMHRYTMDKDEPLFRQAKANADLLSGKVYKSSWEQQREKGFELRMDSLSILTAKAKRDLA
SNVKYKEKYEQTKGKMIGVKTVTDDSQMAHSALATRLQSDRHYRKEYEDTKTKHSASLDM
LTMTHAKKAQDLATETNYRTFLHKYTTLPGDMKVAWAKKAYGLLSDKQYRSDRNWMKGVG
WVAADFLDVIQAKKAGELVSEKKYRQHVSDLKFTSVENTPEMVQAKLSNKLALDRLYREK
GEHIKHNYTLSGDLPEHVQAKLNAMNISETRYKESWTKIRDGGYKLRLDAIPFQSAKASG
NILSNHKYKEQFEKTKGHMIGMKGLESDMNMSHSVNASKLQSDIKYKQDSVNKRSQYHLS
MDMLEMAHAKKAQTLASEQDYRLTLHQYTTLPDDMNVQAAKRAYQLQSENVYRSDLNYLR
GVAWISTGALQMEGFKRATDLISEKKYRQQPCSFKHTSVADSPDIVHAKLSNKLTNERLY
KEKGVNDRHNYTMTLERPEITQAKINAANFSESKYRESWHTLRAQGYKLTMQDIPFQAAK
TSMDLASNVQYKHNHLLDKGKHIGARSILDDPRMLHCMQMGRMTSEQEYRKDALSTSGQY
HLNPDMINLVTAKNAQALASDQDYRKRLHAYTVLPDDIKVQWAKKAYNLQSEKLYKSDLN
FMKGVAWDGVGTPLMELAKKAGELTSNKKYRQLPDSLKFTQVADSPDIVHAKNSYLQCSE
RLYKSGDSDAMHKYTLHADDPDFIRARINAQQISNKAYKASGDEMRSAGYDLRLDAIPFQ
TAKASTNIASDFRYKEAFVKEKGQQVGLLSVEDDPKMVHSLAASKLQSCLGYKRQAQETR
SQFKMHADQPVFQQAKKSQALASNQTYNQRLHDYTFDPQQLNVQHAKQAYKLQSDVSAKS
NLNWIRGVGWXPPGSHKVEMARRXAELGLKSVSTEDAIAQYQHMMMMQQMEEQQQVSEPV
ETSKEFQQSGVNLDAMEILHVKRKKTIQTVKKSSSSSSSMDSSVKKLMMSSNSAIESMMA
STSVSAIENTVKMSTTSEASAIENA
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctgcgccaggtgtgggtttgtggtgtacccagcggagaagatcaattgtatt
gatcagaactggcacaaagcatgctttcactgcgacgtctgtaaaatggtgctcacagcc
aagaactttgttagccacaagaagcggccatactgctctgtacacaatccgagaaacaat
atgttcaccagtgtctatgagacccccatcaatgccaagaagcaagccattgccagcagt
gagcagcactatcaggctaagtttgaggagcagcagacctactcgtactcaggcaccatc
accaaccaggagattgtgagcgtgtcacaggcccaaaagaccatcagtgatgtcaaatac
actgaggaatatgagcagagtaaaggaaaaggcagcttatccaccatgatcacaccagga
tgccagatgtccaagaaagcaaataccttgcacagcagcgtggagtacaataaaggagag
gagaaagagtcaaaatatacctccgtagccaaaacccctgaagtacttctggccgaaagc
caaggacagatcaagtatgtctacactgaagagtatgaacagcagctgggtaaaggcagt
ttccccgcccatctcactcctggctaccaagtttcaaagaaagccacagagatggccagt
ggtgtgaagtaccgtcagatgtatgagcaggagatgaaggggaaggccacctcagatgct
ggggcagcagaattcgcttttgccagagaaaatgcggggaacttcagccagattgcctac
actgaagagtacgagcagcagagagggaagggcagtttcccagccatgatcactcctgcc
taccagcttgccaagaaagcccaggcccacgccagtgatctgaaatacaagaaggacctg
aataagatgaagggctcatcccacttccacaacctgaccagtgaggacaacctggccctg
aagagcgcccgcaaaatcaacaagatcgtragcgaggttgagtacaagaaggaccttgag
aacactaaaggccacagcatcaactactgtgagacgccccagtacaagaatgcatccaag
gctgccaagttcagcagtgataacaagtacaaggagaagtataccaaccacatgaaaggg
cactatgaaggctctgagatggacaagaatgctgtacacgctatgaacgtcagaaagctg
gcaagcaatattgcctacaagcaggagtatgagcaggagaaaactgaccatgtggaatac
aactacccagccaccatcacaccgggctaccagagtcagaggaaactggatccgctcaag
gacaagaactacagacagcacattgaccaagtcaagtacagctcggtgacagatacccct
gacatcgtccaagccagaatcaacgctcaacaactcagcaataagaactacagacaacac
attgaccaagtcaagtacagctcggtgacagatacccctcaaatcgtccaggccaggatc
aacgctcaacaactcagcaatatcaaatacaaggaggactggngaaagaccaagtccaaa
acatgtgacatcggcctggacacgctgaccgtcaaggctgccaaagcatctcgggacctg
gccagtgatattaagtacaaagagtccttcatgaaaaataaagataagacaagcaatgtc
agcgactccaagaccctgcactctcttcaggcgtccaagatgacgagtgagattgagtac
aagaagaactccaaggagaaccagtcccatttcagcttgtccatggacatggtcaacctg
agccatgctaaaaaagcccagtcccttgccagcgacctggactacaggaccaagctccac
cactacaccatcctatccgacgacatccaagtacagcaggccaaaaaggcctataacctg
cagagcgagaatcaataccgttcagatctgacctggatgaagggagttggctgggaggct
gatggatgtctgaatgtgacacaagccaagaaggctggagagcttctcagtgacaaaaag
taccgtcagaaagcggacaacgtcaagttcacccaggtggccgatactccctctatcaaa
cacgccaagaagagccaggaactccagagcaagctaacgtataaggcgggcaargagcag
atgatgcaccggtacaccatggataaagatgagccactcttcaggcaggccaaagccaat
gcagacctgctcagtgggaaagtgtataagagtagctgggagcaacagcgagagaagggc
tttgagttgcgcatggactccttgtccatcctcacagccaaggctaagagagacctggcc
agtaacgtgaaatacaaggagaagtacgagcagactaaggggaagatgattggggtgaag
acggtcactgacgactctcagatggcgcattcggctctggccacccggttgcagagtgat
cgccattacagaaaggagtacgaggacactaaaaccaagcatagtgcctctttggacatg
ttgaccatgacccacgccaagaaggcccaggatctggcaactgagaccaactacaggacc
ttcctgcacaagtacacaaccctgcccggcgacatgaaggtggcctgggccaagaaggcc
tacggactactgagtgataaacagtacaggtcggatcggaactggatgaagggcgtgggc
tgggtggcagcagatttcctggatgtgatacaagcaaagaaggctggcgagctcgttagc
gagaaaaagtaccgtcaacatgtcagcgatctgaagttcaccagcgtggagaacactccc
gagatggtccaggccaaactcagcaacaaactggccctagacaggctgtacagggaaaag
ggggaacatatcaagcacaactacacactctctggagatctgcctgaacacgtgcaggcc
aagctcaatgccatgaacatcagtgagacccgctataaggagtcgtggactaaaatcaga
gatggtggctacaagctccgtttggatgccattcccttccagtcagccaaagcatctggg
aacatacttagtaatcacaagtacaaggagcagtttgaaaagaccaaggggcatatgatt
ggaatgaagggactggagagcgacatgaacatgtctcactctgtgaatgccagcaaactg
cagagtgacatcaagtataagcaggactctgtgaataagcgctctcagtaccacctttct
atggacatgttggagatggcccacgctaaaaaagcccagaccctggccagtgagcaggac
taccggcttacactccaccagtacaccactctacctgatgacatgaatgtgcaggccgct
aagagagcctaccagctacagagcgagaatgtgtaccgctctgacctgaactacctgcgt
ggtgtagcctggatcagcaccggggccctgcagatggagggcttcaaaagggccacagac
cttattagtgagaaaaaataccgccagcagccctgctccttcaagcacacgtctgtcgca
gactcaccagacattgtccatgccaaactcagcaataagcttaccaacgagcgcctgtac
aaggagaaaggggtgaatgacaggcataactacacaatgacactggagagaccggagata
acacaggctaagatcaacgcggctaacttcagcgagagcaagtacagggagtcatggcac
actctaagagctcagggctacaaactgaccatgcaggacatccccttccaggctgccaaa
acctcaatggatttagccagcaatgtccaatacaagcacaaccacctactggataagggc
aagcacatcggcgcccgcagcattctggatgacccgcgcatgctacattgcatgcagatg
ggccggatgacgagtgagcaagagtaccgcaaagacgcactttccaccagtggccagtac
cacctcaatccagatatgatcaatttagtgacagccaagaacgcccaggctctggccagc
gatcaggactacaggaagaggctccatgcgtacactgtcctaccggacgatattaaagtc
caatgggccaagaaggcctacaacctgcagagcgagaaactgtacaagtcggatctgaac
ttcatgaagggcgtggcctgggatggtgtggggacgcctctaatggagttggcaaagaaa
gccggagaactcaccagtaataagaaatatcgtcaactgccagacagtctgaagttcacc
caagtggcggactctccagacattgttcatgctaagaacagctacctgcagtgcagtgag
aggctgtataagtctggagactcggacgccatgcacaaatataccttacatgccgacgac
cctgatttcatcagagcaaggatcaacgcccagcaaattagcaataaagcctataaagcg
tctggggacgagatgaggtcggcaggctacgacttgaggctggatgctattcccttccag
acggccaaggcttccacgaatatcgccagtgatttccgctacaaggaagcctttgtgaag
gagaagggtcagcaggtggggctgctcagtgtcgaggatgacccaaagatggtgcactcc
ctggcagccagcaagctccagagctgcctggggtacaagaggcaggctcaagagacgcgc
tcccagttcaagatgcatgccgaccagcctgtgttccagcaggccaagaagagccaagct
ctggccagcaaccagacctacaaccagaggctccatgactacacctttgaccctcagcag
ctcaacgtccaacacgccaagcaggcctacaagctgcagagtgacgtgagtgccaaaagt
aatctgaactggatcaggggtgtgggctggnacccccctggctcccataaggtggagatg
gcccggcggnctgcagaactgggactgaagagcgtgagcactgaggacgccattgcccag
taccaacacatgatgatgatgcagcagatggaggagcagcagcaggtgtcagaacctgtt
gagaccagcaaagagttccagcagtcgggagtcaatctagacgcaatggagatcctccac
gtcaagaggaagaagaccatccaaacggtgaagaagtccagttcctcctcctcctccatg
gatagcagcgtcaagaagttaatgatgtcttccaactcagccatagagtcaatgatggct
tccacctctgtctcagccattgagaacacagtcaagatgtccacaacgagtgaggcatcg
gccatagaaaatgcttag
DBGET
integrated database retrieval system
