Salvelinus sp. IW2-2015 (Arctic char): 111976990
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Entry
111976990 CDS
T05762
Name
(RefSeq) leiomodin-3-like
KO
K22030
leiomodin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111976990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111976990
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
111976990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomodulin
Phe_tRNA-synt_N
DUF4810
LRR_6
Motif
Other DBs
NCBI-GeneID:
111976990
NCBI-ProteinID:
XP_023861982
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Position
LG17:20501921..20507585
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AA seq
738 aa
AA seq
DB search
MSSQRDRDMEDIHEEDIDEDDILASLSPEELQELQKEMDVLAPDERVPLGQRQNDQKKEK
PSADSDEDEDIDEDDILAKLSPEELKELQKEMDVIAPDERVPVGQRQKSQTEKAPTGSFD
HRGLVDYLYWEKESKRMLEEERVPVTLLPSKKTMEEDAEKKEIAEDLEIVYEVVEEVIEV
EATDGVEGEEVIEEIIEVMIVEEEEEEDVKKEKEEQEKKDIPVKDERVIEKHEHPVNEHL
KESPDDNSTNTVNTTSPLQPPPESADMKENKEIERTEQKSTSQIPEKVKNNTTDAPVPEE
IEMTPEEKRACFVPEKEVRVINKLNIPKLALGGGLGGLGGAKKTSRPSGNETNLDTTLDK
ICNNNPTITDVNLNNIENIPKEMLIEYVNALKKNKHVKTFSIANTGADENIAFTLANMLR
ENRSITTLNIESNFITGKGIIAIIRCLQFNETLTELRFHNQRHMLGHHAEMEVSRLLKAN
NTLLKMGYHFEQAGPRMVVTNLLTRNLDRQRQQRNEEQSKQQQQQQKEVFEMYERALNLP
PGLLAMLGYVPPEIAALMPQLPKGPQGPMEPKPEPSSRFQQNSPLQQPQKQQNTSPQYQH
KQFKHMQCNPIPQQPPSTDSSGNLLKDIQLKRTPKKRDPFLDIDLREDRRAERPNVQLRK
TSGQTRDTGVDEMVELKATLKDVMKTLKPVPRRRQPAKVDVTPRDELLNEIKKSNVAYLK
AVPLPKELESRETSLFNL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccaaagggaccgagacatggaggacatacatgaggaagacattgatgaagat
gatatcctagccagcttgtctcctgaggagcttcaagaactccagaaagagatggatgtt
ttagctccagacgagagagtaccgcttggtcagagacagaatgaccagaagaaagagaag
ccatccgccgactctgatgaggatgaagacattgatgaagatgatatcctggcaaaattg
tctcctgaggagctcaaagagctccagaaagagatggacgttatagccccggatgagagg
gtacctgtgggtcagaggcagaagagccagacagagaaggcgcccacaggttcgtttgac
cacaggggcctggtggattatctgtactgggagaaggagtccaaacgcatgctggaggag
gagagggtccccgtcactctactgcccagtaagaaaactatggaagaggatgctgaaaag
aaagaaatcgctgaagacttggagattgtgtatgaggtggtagaagaagtcatcgaggtg
gaagctacagacggtgttgaaggagaggaagtgatagaggagattatagaggtaatgatt
gtggaggaggaggaggaagaggatgtgaagaaggagaaagaggaacaggagaaaaaggac
atacccgtaaaagatgaaagggtcatagaaaaacatgaacatccagtgaatgagcatcta
aaagagtcaccggatgataacagcactaacactgtaaacactaccagtcctctgcaaccc
ccaccagagtccgcagacatgaaagaaaataaagagattgagagaacagagcaaaagagc
acatcacaaatacctgagaaagtaaaaaataacaccacagacgctcccgttcctgaagaa
atagagatgactccagaggagaagagggcctgttttgttccagagaaagaggtgagggta
attaacaaactaaatattccaaagctggcccttggtgggggccttggtggccttggtggg
gccaagaagacatcaagaccctcagggaatgagacaaacctggacaccactctggataag
atctgcaacaacaaccccactatcacagacgtaaacctgaataacatagaaaacattccc
aaagaaatgctaatagaatacgtcaatgccttgaagaagaacaaacacgtcaagaccttc
agcatagccaacaccggcgcagacgaaaacattgccttcaccctggccaacatgctgaga
gagaaccgtagcatcaccacactgaacatagagtctaacttcataacagggaagggcatt
attgccattatccgctgcctacagttcaacgagacgctcactgagctccgcttccacaac
cagagacacatgctgggccaccacgcagagatggaggtgtcacgcctgctcaaggccaac
aacaccctcctgaagatgggctaccactttgagcaggcgggccccagaatggtggtaacc
aacctgctgaccaggaacctggaccgccagagacagcagaggaacgaggagcagagcaag
cagcagcagcagcagcagaaagaggtgtttgagatgtacgaacgggctctgaacctgccc
ccagggctgctggcgatgctgggctatgtccctcccgaaatcgcggccctcatgccgcag
cttcccaagggtccccagggtcccatggaacccaaaccagagccctcctccagattccag
cagaacagccctctacagcagccgcaaaagcagcagaacacttctccacagtatcaacac
aagcagtttaaacacatgcagtgcaaccccattccacaacaacctcccagcacggactcc
tctggtaaccttctgaaggacatccagctgaagaggacccccaaaaagcgtgaccctttc
ctggacatagaccttagggaggacaggagagcagagaggccgaatgtccagctcaggaag
acatcaggacaaacgagggacacaggcgttgatgagatggtagaactgaaggccactctg
aaagatgtgatgaagacactgaagcctgtccctcggaggcggcagccggccaaggtggat
gtgacgccccgcgatgaacttcttaatgagatcaaaaagagcaacgtggcctatctcaaa
gctgtgccactccccaaagaattggaatcaagagaaaccagtctcttcaatctctga
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