Salvelinus sp. IW2-2015 (Arctic char): 111977021
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Entry
111977021 CDS
T05762
Name
(RefSeq) GATOR complex protein WDR24 isoform X1
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
111977021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111977021
Membrane trafficking [BR:
salp04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
111977021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_HPS5
zf-RING_16
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
111977021
NCBI-ProteinID:
XP_023862040
LinkDB
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Position
LG17:37237252..37244321
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AA seq
793 aa
AA seq
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MEKMSRVTTALGSSTISGRTMFCHLDAPANAISVCRDATQVVVAGRNIFKIYGLEEEQFV
EKLNLRVGRKPSLNFSCADVMWHQMEENLLATAATNGAVVTWNLGKPSRNKQDQLFTEHK
RTVNKVCFHPTEVYMLLSGSQDGYMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFA
ASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPDDRGWLATGGRDKMVKVWDMTTN
RAKEIYCVQTIASVARVKWRPERKWHLATCSMMVDHNIYVWDIRRPFIPFATFEEHKDVT
TGIVWRHQHDPYFLLSGSKDSTLYQHMFKDASRPVDRANPEGLCFGLFGDLAFAAKESLI
SGDANRKPYPGGDRRYPIFFFKKPDLTEQFAHVSSALSVFESSLESRRMDWFVKTACLYL
LSGKPFAELCDHNAKVAKELNRPQVSTTWTMLRIMFSDPANLSTPGPNHIGKLGTLPLMN
SFSMKEMGMGMESRLDRSKGESRQDNIHLELGNSLINSNNDDICPTAENEETEGSEGQAE
YMFGDAELDDDDLYSMEHDIQAAEEQEYTLPQEAFPLRHEIMDNPLAPEHLQQDKADSPH
ASGNEAEVMCLTPIESFSLISISQPLFSPHLPAHFFCPVVREMLSHYAEQGDVQMAVSVL
IVLGDRIRKEIDDLTQEHWYMSYIDLLQRFELWNVSNEVIKLSTCSAITCLNQTSTTLHV
NCSNCKRPMSNRGWICDRCHQCASVCAVCHHVVKGLFVWCQGCSHGGHLEHVKNWLKSSS
HCPAGCGHLCEYT
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatgtctcgggtcactacggccctaggcagcagcaccatcagcgggcgcacc
atgttctgccacctggacgcgcccgccaacgccatcagtgtgtgccgcgatgccacgcag
gtggtggtggccggccgcaatatcttcaagatctacggcctggaggaggagcagtttgtg
gagaagctcaacctgcgcgtgggccgcaagccctcgctcaacttcagctgcgccgacgtc
atgtggcaccagatggaggagaacctgctggccacggctgccaccaacggggcagtagtc
acctggaacctgggcaaaccgtcacgcaacaagcaggaccagctgttcaccgaacacaag
cgtacagtcaataaggtgtgcttccaccccaccgaagtctacatgctgcttagtggctcc
caggacggctacatgaagtgcttcgacctgcgcaagaaagagtctgtcagcaccttctca
ggtcagtcagagagtgtaagagatgttcagtttagcatgaaggattactttactttcgct
gcttcctttgagaatggtaatgtccagttgtgggacatacggaggccagaccggtatgag
aggatgttcacagcccacaccggacctgtgttttgctgtgactggcaccccgatgacagg
ggctggctggccactggtggccgggacaagatggtgaaggtgtgggacatgaccaccaac
cgggccaaggagatctattgcgtccagactatcgcctcggtggcccgggtcaagtggcgt
cctgagaggaagtggcacctggccacctgctccatgatggtggaccacaacatctatgtg
tgggacatccggaggcccttcatcccctttgccaccttcgaggagcacaaggacgtgacc
acaggtattgtgtggcgccaccagcacgacccctacttcctactgtcaggttccaaggac
agcacactctaccagcacatgttcaaggatgccagccggcccgtggaccgggccaaccct
gagggactgtgcttcggcctgtttggcgacctggccttcgctgccaaggagagcctaatc
agtggcgacgccaacaggaagccgtacccgggtggtgaccgccgctaccccatcttcttc
ttcaaaaagcccgacctgacggagcagtttgcccacgtgtccagcgccctcagcgtgttt
gagtcgtctttggagagcaggcgcatggactggtttgtcaagacggcatgcctctacctc
ctcagcggcaaaccctttgccgagctgtgtgaccacaatgccaaggtggccaaggagctc
aacagacctcaggtttccactacatggacgatgcttcggatcatgttctcagacccagca
aacctttcaacgccgggtccaaatcacattggcaaactgggcacccttcctttaatgaac
agtttcagtatgaaggagatgggcatggggatggaaagcaggctggaccgcagtaaagga
gagagcagacaggacaacattcacctagagcttgggaactcgctaatcaacagcaacaac
gacgatatttgtcccacggcagagaatgaagagacagagggaagtgagggccaggcggag
tacatgtttggtgatgctgagctggacgacgatgacctctactctatggagcacgacatc
caggccgcggaggagcaggagtacacgctcccccaggaggccttcccactgcgccacgag
atcatggacaacccgttggcgccggagcacctgcagcaggacaaggccgactcgccgcat
gccagtggcaacgaggcggaggtcatgtgcttgacgcccatcgagtccttctccctgatc
tcaatctcccagccactgttcagcccccaccttcctgctcacttcttctgccctgtggtc
agggagatgctgagccattatgccgagcagggcgacgtgcagatggctgtctcggtgctc
atcgtcctgggagaccgcatccgcaaggagattgacgacctcactcaggagcactggtac
atgtcctacattgacttgctgcagcgtttcgagctgtggaacgtgtccaatgaggtcatc
aagctgagcacgtgcagcgccatcacctgtctgaaccagacatccaccactctgcatgtc
aactgcagcaactgcaaacggcccatgagcaacaggggctggatctgtgacagatgccac
cagtgtgccagcgtttgtgccgtgtgccaccacgtggtgaaggggctgttcgtgtggtgc
cagggctgcagtcacggcgggcacttggagcacgtgaagaactggctaaagagcagttcc
cactgcccggccggctgcggtcacctgtgtgagtacacctga
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