Salvelinus sp. IW2-2015 (Arctic char): 111977257
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Entry
111977257 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: liprin-alpha-3-like
KO
K26226
liprin-alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111977257
Membrane trafficking [BR:
salp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111977257
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Tc-38
Motif
Other DBs
NCBI-GeneID:
111977257
NCBI-ProteinID:
XP_023862409
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Position
LG17:41626713..41697692
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AA seq
1214 aa
AA seq
DB search
MMMCEVMPTISEDGRGGGPSSPGVGAGGPGGAIEGGGYGGRGESRGGGDEGGSTGNLESL
MVNMLTERERLPGEPRRPRTALXTAQLRLRELGHEKGLLSRQLSIALPQEFAVLTKELNV
CREQLLEREEEISELKAERNNTRLLLEHLECLVSRQERSLRMTVVKRQAQSPAGVSSEVE
VLKALKSLFEHHKALDEKVRERLRVALERVTLLEDQLQATAQEVISLRDPIKRRQQGMDG
GKDRLPNGPSSGLEGEIDRQRETEIERLRAELSQLKERLALMCRQVGEIEEQLAAARREV
TKSEEANKKLQRDVKEALCQREDMEERITTLERRYLSAQREATSLHDIKDKLENELASKE
SLHRQSEEKNRQFQERLEDAKQKLQQTLQRAETLPEIEAQLAQRVAALNKAEECHGNFEE
RLRQIEAQLEEKNQELQRARQREKMNDEHNKRLSDTVDKLLSESNERLQLHLKERMAALE
EKNALSEELANMKKIQDDLLANKDQLIAELERIQLEVDQLRGRPGSSYSRSLSGSASELR
YPQGGGSLPAGYGSSSCGVVVRRAHRGRWASPRDESNKYGEWDXRHMLGSKVCEGGLMGF
ASRRRRGRETLFGSELLSPSGQTDVQTLAIMLQEQLEAINKEIKLIQEEKESTQLRAEEI
ESRVSSVALDSNPLLPPSSLGGGRESVGRGYMTPSLTSSTLASPSPPSSGHSTPRLSHSP
ARESDRQNSKESDDCRALALIDSTPPVPRALRLDRMTHTHPGAGLDDHREFRSSQDSLHK
ASKRKSIKSSIGRLFGKKEKGRIGGPGSQSASLASTPSDDLGSADPLGLAKMGTGTVEKD
RRSKKKQDLLEKACRQGLPFASWDGPTVVTWLELWVGMPAWYVAACRANVKSGAIMANLS
DTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPASTHSSTSNIWMTHAEMESLTATIK
PEVKEFSWDQILAYGDMNHEWVGNEWLPSLGLPQYRSYFMESLVDARMLDHLTKKELRGQ
LKMVDSFHRVSLHYGIMCLKRLNYDRKELERRRDENQHQNQDVMVWSNDRVMCWVQAIGL
KEFADNLTESGVHGALLALDDTFDYTDLALLLQMPNQNTQARQTLEKEYNALISMGTERR
PDEDGTKTFSRSPSWRKMFREKDLRGVTSDSSETLPANFRASAISXPSVTLRKVQSEVNS
GPRGESGSVRTYSC
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtgcgaagtgatgcccaccatttcggaggacgggcgcggtggaggcccctcc
tctcctggggtcggggctgggggccctggtggggccatagagggagggggctacggtggc
cgaggagaatcaaggggtgggggtgatgagggaggcagcacagggaacctggagtccctg
atggtcaacatgctgaccgagagggagaggctgcctggagagccgaggagacccaggaca
gccttgnngacggcccagctacgcctcagagagctaggccatgagaagggactcctctcc
agacagttgtccatcgccctgccacaggagtttgctgtgctgactaaggagctgaatgtt
tgccgggagcagctactggagagggaagaggagatttctgagctcaaggcggagagaaac
aacacacgtttgttactagagcacctggagtgtcttgtgtcccgtcargagcgcagtctg
aggatgacggtggtgaagagacaggcccagtccccagcaggggtctccagtgaagtggag
gtcctcaaggccctcaagtccctgtttgaacaccacaaggctttggatgagaaggttcga
gagcgactccgggtygcccttgagagagtgactcttttggaggatcaattacaagcaaca
gcacaagaggtcatctctttaagagacccaattaaaagacggcaacaagggatggacggc
gggaaagatcgcctacccaatgggccgtcttctggattggarggtgagattgacagacag
agagaaacggagatagagcgcctaagagctgagctctcccagctgaaagagagactggcc
ctgatgtgtcgacaggttggggaaatagaggaacagcttgcagccgccaggagggaggtg
acaaagtcggaggaggccaataagaagctccagagggacgtgaaggaggctctgtgccag
agggaggatatggaggagaggattactacattagaacgcaggtaccttagtgctcagagg
gaagcaacctctctacatgacatcaaagacaagctggagaatgagctggccagcaaggag
tcactgcacagacagagtgaggagaagaacaggcagttccaggagcgtctggaggacgcc
aagcagaagctccagcagaccctgcagcgggccgaaacactgcccgagattgaggcccag
ctcgcccaaagagtggctgccctcaacaaggcagaggaatgccatggaaactttgaggag
cgactacgacagatcgaggcacaacttgaagagaagaatcaggagttgcagagggcaagg
cagagagagaaaatgaatgacgaacacaacaaacgcctctcggatacygtggacaagcta
ctgtctgagtccaacgagcgactgcagcttcacctcaaagagagaatggctgccctagag
gagaagaatgcactgtcagaggagttagcaaacatgaagaaaatccaagatgatctttta
gcaaacaaggaccagctcatagccgagctggagaggattcagctggaggtggatcaactg
agggggaggcctggctcttcctattccagatctctttcagggagtgcctcagagctccgg
tacccccagggtggtggctccctcccagccggctatggcagctcctcctgtggcgtggtg
gtccgyagggcacaccgcggccgatgggcttcccctagggatgaaagcaacaagtatgga
gagtgggactagaggcacatgctgggttccaaggtttgtgaggggggcctgatggggttt
gcctcgcgacgacgaagaggaagagagaccctgtttggctcggagctgctctcgcccagc
ggacagacggacgtgcagaccctcgccatcatgctgcaggagcaactggaggccatcaac
aaggagatcaagctgatccaggaggagaaggagagcactcagctgagggcggaggagatc
gagagccgggtgagcagcgtggccttggactccaaccctctcctccccccctcctcactg
ggcgggggcagggagagtgtggggaggggctacatgaccccctccctcacttcctccacc
ttggcctccccgtctccccctagctctggacattccacccctcgactgtcacattcccct
gcccgagagtcagacagacagaacagcaaagagagcgacgactgccgggcgctagccctg
attgactctacccctccagttcctcgcgctctgcgattagacagaatgactcacacacac
ccaggggcggggctggatgatcaccgcgaattccgcagtagtcaggactctctccacaaa
gccagcaagaggaagagcatcaagtcctccattggacgcctgtttggaaagaaggagaaa
gggaggattggaggacctgggagtcagtctgcctctctggcctccacgccctctgatgac
ctgggatcagccgaccccctgggcctggccaagatgggaactggcaccgtggagaaagat
cgccgcagcaagaagaagcaagacctgctagaaaaagcctgtcgtcagggtcttcccttt
gcctcatgggatggccccaccgtggtcacatggcttgagttgtgggtgggcatgcccgcc
tggtatgtggctgcgtgtcgtgccaatgtgaagagcggtgccattatggccaacctgtcg
gacacagagatccagcgggagattggcatcagtaaccccctgcaccgccttaaactgcgc
ctggccattcaggagatggtgtccctcaccagcccctcggcaccggccagcacacactct
tcgaccagtaatatctggatgactcatgcagaaatggagtcattgaccgctaccataaaa
ccagaagtgaaggagttcagctgggaccagatcctggcctatggggacatgaatcatgag
tgggtagggaatgagtggttgcccagcctgggtctgccccagtaccgttcctacttcatg
gagtctctggtggatgctcgcatgctggaccacctcaccaagaaggagcttaggggacag
cttaaaatggtggacagcttccacagggtcagtctgcattatggcatcatgtgcttgaag
cgtttgaactacgacaggaaggagcttgaaaggaggagggatgagaaccaacatcagaac
caagatgtgatggtatggtccaatgatcgagtgatgtgttgggtccaggccattgggcta
aaggagtttgcagataatctcacagagagtggggtccatggggccctcctagccctggac
gacacgtttgattacaccgacctagccctgctcctccagatgcccaatcagaacacacag
gcgaggcagacgctggagaaggagtacaatgccctcatctccatgggaactgagagaaga
ccagatgaggatggcactaagacattcagtcgttcaccctcgtggagaaagatgttcaga
gagaaggacctccggggcgtgacctctgattcctcggaaacgttacccgccaacttccgt
gcctccgcaatctccaksccctccgtcaccctgaggaaagtccaaagtgaagtgaactcc
gggcccaggggtgagtcagggtcagtgagaacatattcctgctag
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