Salvelinus sp. IW2-2015 (Arctic char): 111977341
Help
Entry
111977341 CDS
T05762
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111977341
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
111977341
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
fn3
Ig_VEGFR-1-like_5th
Ig_2
LRR_14
LRR_EndoS
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
111977341
NCBI-ProteinID:
XP_023862488
LinkDB
All DBs
Position
LG18:complement(375151..380030)
Genome browser
AA seq
656 aa
AA seq
DB search
MFQGFSLCFCLALLCLGRCVCSTCPFQCSCFFHTLSDGSKARSVLCNDPEITLVPPNFPA
DTSKLRIEKTAITRISSETFHYLNSLEFLWMSFNSLNSLNVDSFRGLRSLDELRLEGNAL
TSFPWESLTDMPDLRLLDLHNNKISSIPAEATIYIKNLTYLDLSSNSLATVPPEVLLTWL
SVKPSQGDGESSKYILGLHDNPWLCDCRLYDVVQFQKSPSSSVILIDTRLRCADPESLSG
VLFSETELQKCQEPRVHTAVARVRSSLGNNVLLRCGTIGVPVPELSWTREDGKQMNGTVQ
EEVSKEGIIWSILSVRAVSYRDSGKYICKATNFVGTADAIISLVITDSFKNEEQGGSSKT
RKQRVRKTGGFGKAAYQDKLVAKYIPPPXTPIIEPLGPGGFTGKYDIESYDISNSVADGQ
MPGPPITETAMQEVEKVEVLSNLAANASSLQAPAPPEKRVVRLVKIIGDTDHTVSLNWRA
PAAKNTTEFSVLYAVFGERDMRRINVAAGKNRITIEGLVPRTKYIACVCVKGLIPKKEQC
VIFSTDEAASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKRCKKLLGRKSKDIQES
YVTFETFSPGQKPRGMEGEYLAKQQPDESNRLLSARSSVDSEAICRTEGPPNEYFC
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaggttttagtctgtgtttctgcttggcattactttgcctcggacggtgtgta
tgcagcacgtgtccgtttcaatgtagctgtttctttcacactctatcggacggatccaaa
gcaaggagtgtcctttgcaatgacccagagatcactctggtcccacccaactttcctgca
gacacctcaaaactgcggatcgagaagactgccatcacaaggatctccagcgaaaccttt
cactacctcaacagtctggaatttctctggatgtctttcaattctctgaactctttgaat
gtagacagcttccgtggcctgagaagtctggatgagctgagactggaagggaacgctctc
acctcgttcccctgggaatctctcactgatatgcccgacctgaggctactggacctgcat
aataataagatatcgtcgatcccggccgaggcaaccatttatatcaagaacctgacctac
ctggacttatctagcaacagcctagccacggttcctcctgaggttctccttacgtggtta
tctgtgaaaccatctcaaggagatggggaaagttccaaatatattctaggtctccacgac
aacccgtggctgtgcgactgccggctctatgacgtggtccagttccagaagtctccatcg
tcatccgtgattctgatcgacaccaggctgcgctgcgcggaccctgagagcctgtcgggg
gtgctgttcagcgagacggagctccagaagtgccaggagccccgtgtccacacggctgtg
gcccgggtcaggagctccctggggaacaacgtcctgctgcgctgtgggaccatcggagtc
ccagtaccagagctgtcctggacccgggaagacggtaaacagatgaacggcactgttcag
gaagaagtttcaaaggagggaatcatttggtccatcctgagtgtgcgtgctgtctcttac
agggactctgggaaatacatctgcaaagcgaccaacttcgtgggtactgcagatgccatc
atctccctagttatcacagactcctttaaaaatgaggaacaaggtggcagctccaagact
agaaaacaaagggtacggaaaaccggtgggtttgggaaagctgcctaccaggataaactt
gttgcaaaatacatacctccaccaascacacccatcattgaaccactaggaccgggcggt
tttacaggaaagtatgatatcgagagctacgacatctcaaacagcgtggctgacggacag
atgcccggtcctcccatcacggagacggcgatgcaggaagtggagaaggtggaggtcctt
agcaacctggcagccaacgcctcttctttacaggcgccggcaccgccggagaaacgggtg
gtgcgtttggtgaagataatcggcgacaccgaccacaccgtctccctgaactggcgggcc
ccggcggccaagaacaccaccgagttcagcgtcctgtacgccgtgttcggcgagagggac
atgcggaggatcaacgttgctgcgggaaagaaccggatcactattgagggccttgtgcca
aggacaaagtacatcgcctgcgtctgcgtcaaaggcctgatccctaaaaaagagcagtgt
gtaatcttttcaacggacgaggcggccagcgcaagcggcacccagaagctcattaatgtg
gtggtgatcaccgtggcctgcgtgatcgctgtccccctgacactgatcgtctgctgcggg
gcgctcaagaagcgctgtaaaaagctactggggaggaaatccaaagatatccaagaatca
tatgtgacatttgagaccttctccccgggacagaagcctagggggatggagggggagtac
cttgccaaacaacagccagacgagtccaacagactgctctctgctaggtccagtgtggac
tccgaggccatttgtaggactgagggaccgcctaacgagtacttttgttga
DBGET
integrated database retrieval system
