Salvelinus sp. IW2-2015 (Arctic char): 111977413
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Entry
111977413 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 42-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111977413
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111977413
Enzymes [BR:
salp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111977413
Peptidases and inhibitors [BR:
salp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111977413
Ubiquitin system [BR:
salp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111977413
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
111977413
NCBI-ProteinID:
XP_023862588
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Position
LG18:64919020..64948710
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AA seq
1230 aa
AA seq
DB search
MTIVDRSSEKSDLESVGCKRSGSLNFPGGDRNGMDSGCSSWGAGGPSSSDTPRVKTGGCM
GPTPGATVYSSSADRPKEQVVLTSGDGIALPQKVLFPAERLSLKWNQVHRIGSGLQNLGN
TCFLNSALQCLTYTAPLTNYMLSREHSKTCHEPGFCMMCTMQNHITQVFANSGNVIKPIG
VLNELKRIAKHFRFGSQEDAHEFLRYTVDAMQKSCLPLNKLDRQTQATSFIHQVFGGYLR
SRGRLISXNGFNCKAVSDTFDPYLDCALELSDCSHITKALEQFVKPEQLDXENAYRCAKC
KKMVPASKRFTIHRSANVLTISLKRFANYNGGKIAKDVRYAECLDLRPFMSQSHGEPQVY
VLYAVLVHSGFSCHAGHYYCYVKASNGQWYQLNDSSVLVSDIRSVLNQQAYVLFYIRSPD
LKNGGDYNHTCRTPGPLGQSSPRPILTPRVNIGPRHTNTGFIGPQLPPHMAKNLFHVNGN
GSLSDYPSGSKPSTSSDSSMGKTSYSPLATSSSHPLSHPLSHPTGIPDPAKRQKLSFFIG
QGKQIRPSSSSYVQPSSSSQSTSDMSTPRDPHVNGTPSGNRNGHGASFLVPYGQESSEES
DQEGGSGLGNGTAKPHINGRKGETVYGPVPRVLALKTNGIGNGQATMHRNGTNSFSKLSQ
NGHHNINDIKHPEKIHGNGHAMSPGLGSSMSNGAEAHHSGPSKEVYCATPSQASTSQGLH
SADIDSRLSLTPEKMAKTHSGPLPHHAPSTAAKPPSSLADVGAKPLTDALRESSSNPGVL
FLQPTPRALSTPVAPALSGPGLGATKGLGAPHRGPGEDVIETQNSPAAGLDGKPSSKEGR
DQMYSSDREEKGRLNSSDREEKGRLNSSDREEKGRLHSSDRDRDRDRLYSSDRDKDGEGD
RYHRDRSRERNRDHDSDRHRRDHRDRDYHRSYRDRSLSRDRHRNWESEAFLSQRRYHPRE
RDRDRCHHHYHHRTREDRNRDRREHSHHSLPHREELHGRSRWRDEGKERGYHPSQETPLP
TPLSSSTKPSQSLPRPALSPARPALEKRPEPHREERKDSSEECRAKKPKKRKKKKSKDRE
RHRENRTFDVDSSDRAADGSSSSKHKKSRRYDTDTEDEKSGGEIRSTQSSEGHRDPNAXR
EGRRASSSDDERASKKQRYQDDGYDNSYPKKRHRADDNDRSFSSRDGSPTAAPQNASHCH
FNKHTGNGLGQPNGNSHECSTNGLYNDLRQ
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagagaaatctgacctagagtcagtcgggtgcaagcgc
tcaggatcgctgaactttcccggcggtgacaggaacgggatggacagtggctgctccagc
tggggggcggggggcccctcgtcctccgacacccccagggtgaagacagggggctgcatg
ggccccacccctggagccacagtctacagcagcagtgcagacaggcccaaggagcaagtg
gtgctgaccagtggggacggcatcgccctgccccagaaggtgctgttcccagccgagcgg
ctcagcctgaagtggaaccaggtccaccgcattggatcaggtctccagaacctgggaaac
acctgcttcctcaactcagctctgcagtgtctcacctataccgctcccctcactaactac
atgctgtcccgggagcactctaaaacatgtcatgagcctgggttctgtatgatgtgcaca
atgcagaatcacatcacccaggtcttcgccaactctgggaatgtcatcaagcccatcgga
gtcctcaacgagctcaaacggattgcaaagcatttccgctttggcagccaagaggacgcc
catgagttcctgcggtacacagtggacgctatgcaaaagtcctgcctgcctctaaacaaa
ttggacaggcaaacgcaagcaaccagtttcatccatcaagtctttggagggtatctacgg
tccagaggtaggcttattagttaaaatggtttcaactgcaaagcagtctctgacaccttt
gacccttatttggattgtgctttggaactttcagactgctcccatatcacaaaggctctg
gaacagtttgttaagcctgagcagctagatngagagaatgcctacagatgcgctaagtgt
aagaagatggttccagcctctaagagattcaccatccaccgcagcgctaatgtgctcacc
atctcactgaagcgattcgccaactacaacgggggcaagatcgctaaggacgtgaggtat
gctgagtgcctagacctgcgtcccttcatgtctcagtcccacggcgagccccaggtctac
gtactctatgctgtcctggtgcactctggcttcagctgccacgctggacactactactgc
tacgtcaaggctagcaatggccagtggtaccagttgaatgactcctctgtgttggtcagt
gacattaggtcagtcctcaaccagcaggcttacgtcctcttctacatcaggtcacctgat
ctgaagaacggaggggactacaatcacacgtgccggaccccggggcccctcggccagtcg
tccccccgccccatcctcacaccccgggtcaacattgggccacggcacaccaacactggc
ttcatagggccacagctgcccccacacatggccaagaacctctttcacgtcaatgggaat
ggctcgctaagtgactacccctctggctctaagcccagcaccagcagtgacagcagcatg
ggaaagactagctacagcccgctcgccacctcttcctcccatcctctcagccatcctctc
agccatcccacaggcatccctgaccccgccaagcgccagaagctctccttcttcatcggt
cagggcaaacagatccgcccctcatcatcctcttacgtccagccgtcctcttcgtcacag
tctacatcagacatgtctacgccccgggatccccacgttaacggcactccctccggtaac
agaaacggtcacggggcgtcgttcctggtgccgtacggccaggagtcgtctgaggagtcg
gaccaggagggaggcagtggtctggggaacggcacggctaagcctcacattaacgggagr
aagggagagaccgtctacggccccgtccccagagtgctggccctcaagaccaacggcatc
ggtaacggccaggctaccatgcaccgtaacgggaccaacagcttctccaaactcagccag
aacggacaccacaacatcaatgacatcaaacaccctgagaagatccacggtaacggtcat
gcgatgtcgcccggtttgggttccagcatgtctaatggggcggaggctcaccacagtggc
ccaagcaaagaggtgtattgcgccacccccagccaggccagcacctctcaaggcctgcac
agtgccgacatcgacagccgcctctccctcaccccagagaaaatggctaaaactcactct
ggccccctccctcaccacgcaccatcaaccgctgctaaacctccatcctcattggctgat
gttggagctaaaccacttaccgacgccttgagggaatccagctccaaccctggggtctta
ttcctccagcccaccccccgcgccctcagtaccccagtcgccccagccctctccggacca
ggcctgggagccacgaaaggcctcggagccccacacaggggacctggggaggacgtcata
gagacccagaacagcccagctgcagggctggatggaaagcccagctccaaagagggaaga
gaccagatgtactcttccgatcgggaggagaaaggcaggttgaactcttccgatcgggag
gagaaaggcaggttgaactcttccgatcgggaggagaaaggccgactacattcttcggac
cgcgatagggatcgagaccggctgtactcttctgaccgggataaagacggagaaggggat
aggtaccaccgggacaggagccgtgaacgtaaccgggaccatgactcagaccggcaccgg
cgagaccaccgagacagagactaccaccggtcgtaccgggaccgctcgctcagccgggac
agacaccggaactgggagtctgaggcattcctctcacagcgacgctatcaccccagagag
agggacagggaccgctgtcaccaccattaccaccacagaacgagagaggacaggaatagg
gacaggagggagcacagccaccacagcctcccacacagagaggagcttcatggacgctca
aggtggagggatgaaggtaaagagaggggttaccacccttcacaggagacccctctgccc
accccactgagctccagcaccaagcccagtcagtccctacctcgcccagccctttcccca
gccagaccagccctggagaaacgacccgagcctcacagagaggagagaaaggacagctct
gaggagtgtcgggccaagaaacccaagaagcgcaagaagaagaagtccaaggacagagag
aggcaccgagagaataggacctttgacgtggattcctctgacagggcagccgacggcagc
agttcctccaaacacaagaaaagtaggaggtatgatactgacacggaggatgagaagtcg
gggggtgagatccgctctacccagagttccgaggggcaccgtgaccccaatgccmcccgg
gagggtcgcagggcaagcagcagcgacgatgagagggcgagcaagaagcaacgttaccag
gacgatggctatgacaacagctaccccaagaaacggcatcgcgccgatgacaacgaccgc
tccttctcctctcgtgatggatcaccaacagcagctcctcaaaacgcatcgcactgccac
ttcaacaaacacacaggtaatggcttaggtcaacccaatggaaactcccacgaatgttct
accaatggactgtacaatgaccttagacagtag
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