Salvelinus sp. IW2-2015 (Arctic char): 111977479
Help
Entry
111977479 CDS
T05762
Name
(RefSeq) homeobox protein Nkx-2.5
KO
K09343
homeobox protein Nkx-2.3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111977479
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
111977479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
111977479
NCBI-ProteinID:
XP_023862682
LinkDB
All DBs
Position
LG18:complement(51778896..51783118)
Genome browser
AA seq
334 aa
AA seq
DB search
MIIMLPSPVISASTTPFSVKDILKLELQQQSQQQRLASHLGPPHECSHPVSQQHRFALQS
PPSCMLAGRDRDSPSPGLLEREARMSYLGSLTVQERLMETGLAGEIFTSPGLQGHSADTS
LEVEQEDIDTRVRDCEESTQVHSDLEKPPKQQRARRKPRVLFSQAQVFELERRFKQQRYL
SAPEREHLANTLKLTSTQVKIWFQNRRYKCKRQRQDKNLEMAGHLHHPPPPRRVAVPVLV
RDGKPCLAGSQNYNTSYTVGAASPYSYNGYPAYNNPVYTNTYSCTYSSLPALAPNTTANA
FMNMGLGNLGVSQSQAQTSQGTACQGTLQGIRAW
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgataataatgcttcctagccctgttatttctgcctccaccacgccgttctcagtcaag
gacatactgaagctggagcttcagcagcagtctcagcagcagcggctagcctcacacctt
gggccgccccacgagtgctctcacccggtgtcgcagcagcaccgcttcgccctccagtcg
cccccgtcttgtatgctggctggcagagacagggacagtcccagccccgggctcttggag
agagaggcgaggatgtcctacctgggtagtctgaccgtgcaggagcggctgatggagacg
ggtcttgccggggagatattcacttccccggggctacagggacactcagccgacaccagc
ctggaagttgagcaggaggacatagacaccagagtgagggactgcgaggagtccacgcag
gtgcactcggacttggagaaacccccaaaacagcaaagggcccggcggaaaccacgggta
ctcttttcccaggcgcaggtgttcgagctcgagcgacgcttcaagcagcagcgttaccta
tccgccccggagagggaacacctggccaacactctgaaactgacctccacacaggtcaaa
atatggttccagaacaggaggtataagtgtaaacggcagcggcaggacaagaacctagag
atggccggacatttacaccatcctcccccgcctaggagagtggcagtcccggtgctggtg
cgtgatgggaagccctgcctggctggatctcagaactataatacatcctacactgttgga
gcggccagcccctatagttataatggctacccggcttacaataacccggtgtatactaac
acttactcatgcacgtactctagcctgcctgctctagcgcccaacactactgctaacgcc
tttatgaatatgggccttgggaacctgggcgtgtcgcaatctcaggcccaaacatcacag
ggaacagcctgccaaggaactctgcagggcattcgggcctggtag
DBGET
integrated database retrieval system
