KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111977494
Entry
111977494         CDS       T05762                                 
Name
(RefSeq) chondroadherin-like
  KO
K06248  chondroadherin
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510  Focal adhesion
salp04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:salp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111977494
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    111977494
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:salp00535]
    111977494
Proteoglycans [BR:salp00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    111977494
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_5 LRR_9 LRRNT LRRCT
Other DBs
NCBI-GeneID: 111977494
NCBI-ProteinID: XP_023862700
LinkDB
Position
LG18:10947667..10958185
AA seq 363 aa
MRCVSFLSVWTYLLVLAPVVWGAPSQCPALCHCHGDLQHVICDNVGLKNIPQVSEATRLL
NLQRNNLGSLPTGSFASSKGLISLHMQHCQLREIGGQAFKGLKKLIYLYLSNNEITSIKP
GAFEDLAELTYLYLDGNRISDLPKGIFSPMINLFILQLNDNKLRDIKPGTFAGAKDLRWL
HMSGNEMSSLQPGSLDDVENLAILHLDRNRLSTYPGLAMSKLRVVEELSLAKNPLRSIPD
NAFQSFGRYMEKLHLDGMGLEKFSDGAFNGMKAIKSLHLDNNKLKSLPKSLEFTTITNLT
LANNPWSCTCTLAPLRKWMDSTRQRPDALCASPSSQRGKQIRDSSAFSDCTVKTKRAKKG
TRH
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgcggtgtgtgagctttctctcggtgtggacctacctgctggtcctcgccccggtggta
tggggcgcacccagccagtgcccagccctgtgtcactgccacggggacctgcagcatgtc
atctgtgacaacgtggggctaaagaatattccacaggtgtccgaggccacccgtctgctc
aacctgcagaggaacaacctgggcagcctgcccaccggctccttcgccagcagcaagggt
ctcatctcgttgcacatgcagcactgccagctccgcgagatcggcggccaggccttcaag
gggctcaagaagctcatctacctctacctgtccaacaacgagatcaccagcatcaagcca
ggtgccttcgaggacctcgccgagctcacctacctctacctggacggcaaccgcatcagc
gacctacccaagggcatcttctcgcccatgatcaatctgttcatcctgcagctcaacgat
aacaagctgcgcgacatcaagccaggcaccttcgccggagccaaggacctgcgctggctg
cacatgagtggcaatgagatgagctcgctgcagccgggctctctggacgacgtggagaac
ctggccatcctgcaccttgacaggaacaggctgtccacctaccccggtctggccatgagc
aagctgagagtggtggaggaactgagcctggccaagaaccccctgagaagcatccctgac
aacgccttccagagcttcggacgctacatggagaagctgcacctggacggcatggggctg
gagaagttttctgacggcgcgttcaacggcatgaaggccatcaagtctctgcacttggac
aacaacaagctcaagtccctgcccaagagcctggagttcaccaccatcaccaacctcacg
ctcgccaacaacccctggagctgcacctgcacgctagcccctctgcgcaagtggatggat
tctacccgccagcgccctgatgcgctctgtgcctctccgtcctcacagagaggaaagcag
attagggacagctccgccttcagcgactgcacagttaagacaaagagagccaagaagggc
acacgccattaa

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