Salvelinus sp. IW2-2015 (Arctic char): 111977689
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Entry
111977689 CDS
T05762
Name
(RefSeq) girdin-like isoform X1
KO
K25392
girdin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111977689
Cilium and associated proteins [BR:
salp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
111977689
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
KASH_CCD
GAS
DUF4472
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
111977689
NCBI-ProteinID:
XP_023863000
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Position
LG18:45558924..45647062
Genome browser
AA seq
1920 aa
AA seq
DB search
MESEVFTPLLEQFLLTPLVAWVKAAGNSSGNDGTKLSEYIELLDGIYLNEIMLEINPKAT
VQRTNKKVNNDSTLRIQNLSILIRQIKSYYQETLQQLVAMPLPNVLVLGRNPLSEQGLEE
MRKLLLLLLGCAVQCEKKEEYIERIQTLDFDTKAAIASHIQEVTHNQENVVDLQWLEGGD
LPPEDLDSFSRNMAFHLKRLVDERDDQLETIVELTQERDCGQYSPPPLFAQSPNDSPSMR
RTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDCRQELDNMETENKRIQQESLQLLSD
ARSARAYRDELDVLREKAIRVDKLESEVGRYKERLHDIEFYKARVEELKEDNQVLLETKA
MLEDQLEGTRTRSDKLHELEKESLQLKSKIHDMEMERDMDRKRIEELLEENLVLEMAQKQ
SMDESLHLGWELEQLSKTPDLTEVPQKSLGHEVNELTSSRLLKLEKENQALLKTVEELRG
SASEDAPAHRLKADKENQRLTQRLVQLESELNTERESLHSAESLGTDLMKEKALLEKTLE
TLRENADRQVKGLEQENEHLTQTVSSLRQRSQVGAEARVKDVEKENRVLHESIRETSSKL
NKLEFERKQLRKDLEMYKDKGERAEELEVEAQRLERENAALQKRVASLGITCDKVVSLEK
ENSELEAEGRRLKKVVDGLRSTSFQLEALEKENSQLDEENLELRRTAEVLRSAGNKAAQL
ELENLELESERSQLKRSLELLKASSKKTERLEVSNQGLDTENQRLQKALDNSSRKMQQLE
GELQDIEQENQSLQRSLEELKISSKRLEQLEQENKTLEQESSQLEKDKKHLEKDNKRLRQ
QAEIRDSKMDEDNLRISHLEKDNRLLGKEMTSFKDSCNRLKDLEKENKELVKQATIDKKT
LVTLREELVSEKLRTQQMNNDLEKLTHELEKIGLNKERLLQDEQSSDHDRYKLLEFKLES
TLKSTLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVQSSPPR
RGDREDSQAVNKWEKESHETTRELLKVKDRLIEVERNNATLQAEKQALHTNLKQLETQSS
NLQAQILALQRQTASLQENNTTLQTQNAKLQVENSTLNSQSGTLMAQNAQLATQQSSTEN
EKEGVVREREDLRSTYEMLLRDHEKLAALHERQASEYEGLIGKHGGLKSAHKSLESQHRD
LEDRYNQLLRQKDQLEELEKQLKAEQEKMLSENKSHEATAIDYYKLKEANEKLNMAHRQL
VKDNEGLQVDHKNLKSQMNGAKLEQTRLEAEFSKLKEQYQQLDITSTKLTNQCELLSQLK
GNLEEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKI
MDQYKFYDPSPPRRRGNWITLKMKKLIKPKSLERMRSLTLTPTCSESSEGFLGLPLDSQD
SSSIGSGSNSLDDTLTQKRNSRKKDSQRVQHSHVQSNQGNQGSSNAVKWLPFMRNRSKEK
DKAKDIYRRSMSMNDLLQTIALAGGQWAGSTENLEGPVEANGGSRSRHMKELGSMAYSTN
AINYATLTLPTGNRAKRSLKIKDNASCEDVPASSDDPIGIRGQGLQVFSSAQALSPSAFD
PSAMCRVPCSICYSRASSLHSIKTISSNTSHSAPLEAKGTLNGNLSRPHSESSGEFSLSL
DQEEWSSGSSPVQQPLSRSSHQSPMLLQRSLEPQATQAKKKNGSASEVLSLQQFLEERID
PAESGSQENLTVESPRLSGGTEHVQRDRAERGSTSCTKGRGILRSASGKAAPVNSDGRPS
RGGQPGHPSLRKAESTRVKGMVQPRVSLSSQSKAVSVSERLDISSTSFSTLPRASSVIST
AEGSTRRTSIHDLLSKDARQPVSVDHSPSSKASPRTSTTPNVEVLQERRKSKSSGEQQSS
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgaggtttttacgccattgctggaacaatttctgctcacgcctttggtcgcc
tgggttaaggcggctgggaattcatcaggaaacgatggcaccaaactatcggaatacatt
gaattgttggatggcatttatttaaacgagatcatgcttgagataaatccaaaagccact
gttcaaagaaccaacaagaaagtgaacaatgactcaacactgcgcatacaaaacctctcc
atcctgatccggcagataaagtcgtactaccaggagaccctccagcagctggtggcgatg
cctctccccaacgtgctggtgctgggcaggaacccgctcagtgagcaaggtctggaggag
atgaggaagctgttgttgctgttgcttggctgtgctgtccagtgtgagaagaaagaagag
tacatcgagaggatccagaccctagactttgacacaaaagctgccatagcatctcacatc
caagaggtgacgcacaaccaggagaatgttgtggacctacagtggctggaggggggtgac
ctgcccccagaggacctggactccttctccaggaacatggccttccatctcaaacgcctg
gtggacgagagagacgaccagctggagaccattgtggagctgacccaggagagggactgt
ggacagtactctcccccgcccctctttgcccagtcgcccaacgactcgcctagcatgcgc
cgcacagagagccgccagcacctgtctgtggagctggccgacgccaaggccaagatcaga
cgcctgcgccaggagctggaggagaagagtgagcagctgctggactgtagacaggagctg
gacaatatggagactgagaacaagaggattcagcaagagagcctgcagttgttgtcagat
gcacgttctgccagggcctatcgtgacgagctggacgttctgagagagaaggccatcaga
gtggacaagctggaaagtgaagtgggacgctacaaggagaggctccatgacattgagttc
tacaaagctagagtggaggagctgaaggaggacaaccaggttctgctggagaccaaggcc
atgcttgaggaccagctagaaggaaccaggactcgctctgacaaactccacgaactggag
aaagagagcctgcagctcaaatccaagatccacgacatggaaatggagcgggacatggac
aggaagcgtattgaggagctgctagaggagaacctggtgctagaaatggcccagaaacag
agtatggacgagtctctccacctgggctgggagctggagcagctctccaagacccctgat
ctgacagaggtgcctcagaagtcactgggccacgaggtgaatgagctgacgtccagccgc
ctgctgaagctggagaaggagaaccaggccctgctgaaaaccgtagaggagctgaggggc
tctgccagcgaggacgcccctgcacaccgcctcaaggccgacaaggagaaccagaggctc
acccagaggctggtgcagctggagagtgagctgaacacagaaagggagagtctgcacagt
gcagagagtctcggcaccgacctgatgaaggagaaggctctgttggagaaaaccctggag
acactgagagagaatgcagatagacaggtgaaaggcttggagcaggaaaacgagcatttg
acccagaccgtctcatcgctgaggcagcgctcccaggtgggcgctgaggcgcgggtcaaa
gacgtggagaaggagaaccgcgtgctgcacgagtccatccgggagaccagctccaagctc
aacaagctggagtttgagcgcaaacagctgcgtaaggacctggagatgtacaaggataag
ggcgagagggccgaggagctggaggtggaggcgcagcggctggagagggagaacgcggcc
ctgcagaaacgagtagccagtctgggcatcacctgtgacaaggtggtgtctctggagaag
gagaactccgagctggaggcagagggccgtcgtttaaagaaggtggtggacggcctgcgg
agcacatccttccagctggaggccctggagaaggagaactcccagctggacgaggagaac
ctggagcttcgcaggactgctgaggtgctccgctcggctgggaacaaggcggctcagctg
gagctggagaaccttgagctggagagtgagaggagccagctgaaaaggagcctggagctg
ctcaaggcctcctccaagaaaactgagaggctcgaggtgagcaaccagggcctggatacg
gaaaaccagcggctgcagaaggccctggacaacagcagccgcaagatgcagcagctggag
ggggagctgcaggacatagagcaggagaaccagagcctgcagaggagcctggaggaactg
aagatctccagcaaacgtctggagcagctggagcaggagaataagactctggagcaagag
agctctcagctggagaaggacaagaagcacctggagaaggacaacaaaaggctgagacag
caggcggagatcagggactccaagatggacgaggacaacctgaggatcagccacctggag
aaggacaaccgcttgctgggcaaggagatgacctccttcaaggactcctgcaaccgcctc
aaagatctggagaaggagaacaaggagctggtcaaacaggccaccatcgataagaagacc
ctggtcactctgcgagaggaactggtgagtgagaaactgcggactcagcagatgaacaat
gacctggagaaactgacccacgagctggagaagataggcctcaacaaggagaggctgctg
caggacgagcagagctctgaccacgacaggtacaagctgctggagttcaagctagagtcc
actctcaaatctactctggagatcaaggaggagaagatagcagccttggaggccagactg
caggagtcctccaacctcaaccaacaactgcgccaggagctcaaaactgtgaagaagaac
tacgaggccctgcgacagagggaggaggaggagagaatggtgcagagctcgccccccagg
agaggggacagggaggactctcaggcggtcaacaagtgggagaaggagagccacgagacc
acccgggaactgctcaaggtcaaagaccgcctcatcgaggtggagagaaacaatgccacc
ctacaggcagagaagcaggccctgcataccaacctgaagcagctggagacccagagcagt
aacctgcaggcccagattctggctctgcagagacagactgcatctctacaggagaacaac
accaccctacagacccagaatgccaaactacaagtggagaactccaccctgaactcccag
agcggcactctcatggcccagaatgcccagcttgcgacacagcagtccagcacggagaac
gagaaggagggggtggtgagggagagggaggacctgaggtccacctatgagatgctactg
agggaccatgagaagttggctgccctgcatgagaggcaggcctcggagtatgagggcctc
attggcaaacacggaggcctgaaaagtgcccacaagagcctggaatcacagcacagagac
ctggaggacaggtataatcagttgctgaggcagaaggatcagctggaggagctggagaaa
cagctgaaggcagagcaggagaagatgctgtctgagaacaagagccacgaggccacggct
atagactactacaaactgaaggaggcgaatgaaaagctgaacatggcacaccgccagctg
gtgaaggataatgagggcttgcaggttgaccataagaacctgaagagccagatgaacggt
gccaagctggaacagacccgcctggaggcagagttctccaaactcaaagagcagtaccag
cagctggacatcacctctaccaagctcaccaaccagtgtgagttgctgagtcagttgaag
gggaacctggaggaggagaaccgtcacctgctggaccagatccagaccctgatgctacag
aaccgcaccctgctagaacagaccatggagagcaaggacctgttccacgtagaacagaga
cagtacattgacaagctgaacgagttgaggagacagaaggagaagctggaagagaagatc
atggaccagtacaagttttatgacccctcacctccacggagacgagggaattggatcacc
ctgaagatgaagaagctgatcaagccgaagagtctggagcggatgcgttccctgacactg
acgcccacgtgctctgagtccagcgagggcttcctggggcttcctctggacagccaggac
tcctcctccataggctctggctccaactccctggacgacacgctgacacaaaagaggaac
agcaggaagaaagactctcagagagtgcagcactcccatgtgcagagtaaccagggtaac
caaggttcctctaatgctgtgaaatggttaccctttatgaggaacagatcgaaggagaaa
gacaaagcgaaggacatctaccgccggtccatgtccatgaacgacctgctgcagaccatt
gccctggcagggggccagtgggcgggcagcacagagaacctggaggggcccgtggaggcc
aacgggggcagcagaagtcggcacatgaaggagctgggctccatggcctactccactaac
gctatcaactacgccaccctcactttgcccactggcaacagggccaagaggagcctgaag
atcaaagacaacgcttcctgtgaagacgttccagcatcctcagatgaccccattgggatc
agaggtcaaggcctacaggtctttagcagtgctcaggctctgtcgccctctgctttcgac
ccgtccgctatgtgcagagtcccctgtagcatctgttactcgagagcctccagcctccat
agtatcaagaccatcagcagtaatacctcccactccgctccgctcgaggccaaaggcacg
ttgaacggaaacctcagcaggccccacagtgagagcagtggggagttcagcctcagtctg
gaccaggaggagtggtccagcgggagcagccctgtccagcagcccctgtcccgctcctct
catcagagccccatgctgctgcagaggtccctggaaccccaggccacacaggccaagaag
aagaatggcagcgccagcgaggtgctctctctacagcagttcctagaggagcgcatcgac
cctgcagagtctggcagccaagagaatctgaccgttgagtctccccgcctctctggaggc
actgagcatgtgcagagggaccgggctgagcgaggctccacctcctgcaccaaggggcgg
ggcatcctgcgctcagccagtgggaaggcagcgccagtgaactccgatggccgcccctcc
aggggtggccaaccaggtcatcccagcttacgaaaggcagagagtacgcgtgtgaagggc
atggtccagccacgggtcagcctctcctcccagagtaaagccgtgtctgtgtctgagcgt
ctggacatctcctccacctccttctccacgctgccccgggccagcagcgtcatctccaca
gctgagggctccacgcgtcggaccagcatacacgacctgctgtccaaagacgcccggcaa
cccgtgtctgtggaccactcaccctcctcaaaggcctctcctcgcacctccaccacgccc
aatgtggaagtgttacaagagcgcagaaagtcaaaaagcagtggggagcaacaaagctcc
taa
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