Salvelinus sp. IW2-2015 (Arctic char): 111977709
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Entry
111977709 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: attractin-like protein 1
KO
K24332
attractin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
salp04091
]
111977709
Lectins [BR:
salp04091
]
C-Type lectins
Others
111977709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_5
Kelch_3
Kelch_4
EGF_LMN_ATRN
Kelch_6
CUB
Kelch_2
EGF_TEN
PSI
NANM
EGF_Teneurin
EGF_2
TMEM100
Motif
Other DBs
NCBI-GeneID:
111977709
NCBI-ProteinID:
XP_023863027
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All DBs
Position
LG18:complement(45037287..45378737)
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AA seq
1374 aa
AA seq
DB search
MGGDCRGMRRRTWTKYSNTRPQDIQIYFGAFLMLYLVFYTEASVSKSCDKNCFSGKCTNG
TCVCDQGWVGDLCQHCQGRFKLTESSGSLTDGPINYKYKTKCTWLIEGYPNAVLRLRFNH
FATECSWDHTYVYDGDSIYAPLVAVFSGLVVPETRGNETVPEVVATSGYALLHFFSDAAY
NLTGFHISYSVNSCPNNCSGHGKCSTGNSIASRVYCECDKYWKGEACDIPYCRNNCGSPD
HGYCDLTGEKSCVCNDSWQGPDCALSVPSTESYWVMPNVKPFGQSLGRASHKTVVHGKLM
WVVGGYTFNYSSFHMVLNYNMESSTWDVVPINSGPLQRYGHSLALYQDDIYMYGGKLEAG
SGNVTDELWVFNIPSRTWSLRTPSSLVQGQPYAVEGHSAHLTELTNGDLVMVVIFGYSPV
YSYISKVQEYNIRTNSWQVPETNGAIVQGGYGHSSVYDSSGRCVYIHGGYKALPANKYGL
VDELYRYEVQTRTWMILRESGLARYLHTAVLSNGALLVFGGNTHNDTSLSNGAKCFSADF
LAYDIACDEWKVLPRPDLHRDVNRFGHTSVVSNGSMYVFGGFSGVLLNDVLVYTPPSCQA
FDEEQRCDNAGPGIRCVWFRDHCVPWVTGHANGSVPAPFCPTRTNSEDERCFRFSDCVSC
TANTNGCQWCEDKKCISASSNCTVSVKNFVKCHVRNEHICSKLVNCKSCSLNIHCQWELQ
QQECHAIPAQLCGEGWHHVGEACLRINSSRESYDNAQHYCKNLDGNIASLTTAKQVDFVL
DELQKYQLQEKKLAPWVGLRKINISYWGWEDMSPFTNSSLQWLPGEPSDSGFCAYLERAE
VAGLKANPCTATTDGLICEKPVVSPNQSARPCKAPCSLRTTCANCTSQAMECMWCSSTQR
CVDSNAYVISFPYGQCLEWQTGVCVSQNCSGLRTCGQCLDQAECGWCGDPTNTGKGQCME
GSYRGPMKSPSRQTRERESYRDMVLEPGLCPRDKGFDWAYIHCPACQCNGHSTCVNGSAC
EQCRNLTTGLQCQTCMPGYHGDPTNGGKCQACKCNGHANLCQVSTGKCYCQTKGIKGDQC
QLCDSENRYLGNPLRGTCYYNLLIDYQFTFSLLQEDDHHYTAINFMATPEQSNKNLDMSI
NASNNFNLNITWSIGSTAGTISGEEVPIVSKTNIQEHRDSFSCEKFNFRVNSNITFYVYV
SNFSWPIKIQIAFSQHNSIMDLVQFFVTFFSCFLSLLLVAAVVWKVKQTCWASRRREQLM
RERQQMASRPFASVAVALDVSAGQEQEELLQGQVEGVPKPIAVEPCWGSRAGVLTVLLCL
PRLPSGIPPPGQSGIAIASALIDTSQQKPGDFKDKYHGLKNRKLHAVTHQGTCV
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggactgccgaggaatgcgtcgacgcacatggactaaatattcaaatacgaga
ccccaggacatacaaatatattttggggcatttcttatgctgtacttggtgttttacacc
gaagcatcagtctccaagtcctgtgataaaaattgcttctctgggaaatgcaccaatggg
acttgcgtctgtgaccaaggatgggttggagacctgtgtcaacactgtcagggaagattc
aagttaacagagtcatcgggttccctcaccgatggaccaatcaactacaagtacaagacc
aagtgcacctggctgatcgagggctacccaaacgctgtgctcaggttgcgcttcaaccat
tttgccacggaatgtagctgggaccacacgtacgtctatgacggagactccatctatgca
cctctggtcgcagtattcagcggtctcgttgtcccggaaacgagagggaacgagactgtt
ccggaagtggtagccacctctggatacgcactgttgcactttttcagtgacgctgcctac
aacctgactggattccacatctcctactcggtcaactcgtgccccaataactgctcaggc
catgggaaatgcagcacagggaactccatcgccagccgggtgtactgtgagtgtgataag
tactggaagggcgaggcctgtgacatcccctactgcaggaacaactgtggcagccccgac
catggctactgtgacctcactggggagaaaagctgtgtctgtaacgacagctggcaaggc
ccagactgtgctctgtcagtaccatccacagagtcttattgggtgatgcctaatgtcaag
cccttcggacagtctctgggcagggcctcccataagactgtggtccacgggaaactcatg
tgggtcgttggaggatacaccttcaactacagctccttccacatggtgctcaattataat
atggagagcagcacttgggatgtggtgccaatcaatagtggtcctctgcagagatatggc
cattctctggctctctaccaggacgacatctacatgtatggggggaagctggaggccggt
tcaggcaacgtgacagatgagctgtgggtctttaacatccctagtcgaacttggtccctg
aggaccccgagcagtctggtccagggacagccctacgccgtggagggacactccgcccac
ctgactgagctgaccaatggggacctggtgatggtggtcatcttcggctactcacccgtc
tacagctacatcagcaaagtgcaggagtacaacatcaggacaaactcctggcaggtccct
gagaccaacggggccatcgtccagggtggctatggccacagcagtgtgtatgacagctcc
ggcaggtgtgtgtacatccacgggggctacaaggccctgcctgccaacaagtatggcctg
gtggacgagctgtatcgctatgaggtgcagacccggacctggatgatcctgagagagagt
ggtctggcacggtacctccacactgcagtgctgagcaatggggctctgctggtgtttgga
ggaaacacccacaacgacacatcccttagtaatggagccaagtgcttctcggctgacttc
ctggcctacgacatagcttgtgatgaatggaaagtcctgcccaggccagatctccaccgt
gatgtcaaccgctttggccacacctctgttgtcagcaatgggtccatgtatgtgtttgga
ggcttctctggtgtgctgctgaatgacgtgctggtctacacccctcccagctgccaggcc
ttcgatgaggagcagcgctgtgacaacgctggccctggtatccgctgtgtctggtttagg
gaccactgtgtcccctgggtcaccggccatgccaacggcagcgtgcccgctcccttctgc
ccaacacgcaccaatagtgaagacgagaggtgcttcaggttctctgactgtgtcagctgc
actgccaacaccaatggctgccagtggtgtgaagacaagaagtgcatctctgcttccagc
aactgcactgtgtctgtaaagaacttcgtcaaatgccatgtgagaaatgaacatatctgc
agcaagctggtcaactgtaagagttgctccctcaacatccactgtcaatgggagcttcag
caacaggagtgccatgccatccctgctcagctctgtggggaaggctggcatcatgttggg
gaggcttgcctcaggatcaactccagcagggagagctatgacaatgcccagcactactgt
aagaacctggacgggaacatagcctccctcaccaccgccaagcaggtggactttgtactg
gacgagctgcagaagtaccagctacaagagaagaagttagctccgtgggtgggcctaagg
aagatcaacatctcgtactggggctgggaggacatgtctcccttcaccaactcctctctg
cagtggctgcccggggagcccagcgactcaggcttctgtgcctacctggagagggcagag
gtggcagggctcaaggccaacccctgcaccgccacaactgatggactcatctgtgaaaaa
ccagtcgtgagccccaatcagagtgcccgcccgtgtaaggcgccctgctccctgcgcacc
acctgtgccaactgcaccagccaggccatggagtgtatgtggtgcagcagcacccagcga
tgtgtggactccaacgcctacgtcatctccttcccctacggacagtgtctggagtggcag
actggagtctgcgtctctcagaactgttcgggcctgaggacgtgtggccagtgtttggat
caggcagaatgtggctggtgtggagaccccactaacacagggaaaggccagtgtatggag
ggttcataccgcgggcccatgaagagcccctccagacagaccagagaaagggagagttac
cgagacatggtactggagcctggtctttgccccagagataaagggttcgactgggcctac
atccactgccctgcctgccagtgtaatggccacagtacctgtgtcaatggtagtgcttgt
gagcagtgcaggaacttgaccactggactgcagtgccagacctgcatgcctggttaccat
ggagaccccactaacggtgggaagtgccaggcttgcaagtgcaacggacatgccaatcta
tgtcaggtgtcgacagggaaatgttactgtcaaaccaaggggatcaagggagaccagtgc
cagctttgcgactccgagaaccgttaccttggcaaccccctcagaggaacgtgctactac
aacctgctgattgactatcagttcaccttcagccttctccaggaggatgaccaccactac
accgccatcaacttcatggccacccctgaacagagcaacaagaacttggacatgtcgatc
aatgcatccaacaactttaatctcaacatcacctggtctattggatcaacagctggcacc
atctctggcgaagaggtacccattgtgtccaagaccaatatccaggaacacagagacagc
ttctcctgtgagaagttcaacttccgggtcaactccaacatcaccttctatgtctatgtc
agcaacttctcctggccaatcaagatccagatcgccttctcccagcacaacagcatcatg
gacctggtgcagttttttgtcacctttttcagctgtttcctgtccctgttgctggtggca
gcggtggtgtggaaggtcaaacagacgtgctgggcatccaggaggagagagcagctcatg
cgggagcgacagcagatggccagccgtccctttgcctcggttgccgtggcgctggatgta
agcgccggccaggaacaggaagagctgctgcaggggcaggtggagggtgtgcccaagcct
atagcagtggagccatgttgggggagcagggccggcgtactgaccgtcctcttgtgtctg
cccagactgccttcaggaatacccccacctggccagtctggcattgccatcgccagtgcc
ctgattgacacctcgcagcagaaacctggagacttcaaagataagtaccatggcctgaag
aaccgcaaactgcacgcagtaacacatcaggggacctgtgtttga
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