Salvelinus sp. IW2-2015 (Arctic char): 111977725
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Entry
111977725 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic polyadenylation element-binding protein 3-like isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04114
Oocyte meiosis
salp04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
111977725
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
111977725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111977725
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111977725
Factors involved in mRNA localization
Trans-acting binding proteins
111977725
mRNA cycle factors
P-body specific factors
111977725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
zf-B_box
Motif
Other DBs
NCBI-GeneID:
111977725
NCBI-ProteinID:
XP_023863055
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Position
LG18:28249856..28306639
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AA seq
658 aa
AA seq
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MQDDLLMDKNKAQPHQQQDPTVEPPSTPTPSEPPTSEESPSSVSNQASXALNKEKVLMES
PILPGLNFHQPQETGGTLSPSFGRTWSTGTTNTVDDNFFQGIPSVNGTMLFQNFPHHVNP
VFGGNFSPQLGLAQSQQQAQQQQQQPPPQQRRSPVSPNQGPFPQRNTYSHQSVMNSKASS
PASSSGWNNHQNAAWSTASNPWSGLQAGRDPRRAVGVGVGVGVGVGVPSSMNPISPMKKP
YSSNVIAPPKFPRAGPLTPKSWMEDNAFRTDNSNNMLPFQDRNRPFDAFSLHSLENSLMD
MIRTDHDKGKPHPAGGPPMTIADIIWRNHFAGRMGLNFHHPGADHIMPLNTRSYGRRRGR
SSLFPFEDGFLDDGHGDPSLTPGLNSPTRCQNGERMERYSRKVFVGGLPPDIDEDEITNS
FRRYGHLVVDWPHKAESKSYFPPKGYAFLLFQEETSVQALIDACIEEDGKLYLCVSSPTI
KDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAG
IDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQ
GARCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVSFRWS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgatttactgatggacaaaaacaaagcccaacctcatcagcagcaagatcca
accgtagaacctccctccactccgaccccctcggaaccccctacatcagaggagagccca
tcgagtgtgagcaaccaagcatcttragctctcaacaaagagaaagtgctgatggagtct
ccgatcctgccgggtttaaattttcatcagccgcaggaaaccggtggcaccctgtccccc
tcatttggtagracttggtccactggaaccacaaacaccgtggacgacaatttttttcaa
ggaataccttcggtgaacggaacaatgcttttccagaacttcccccatcacgtcaatccg
gtatttggaggcaatttctcacctcagcttggcttggcacagtctcagcagcaagcccag
caacagcagcagcagccaccgccgcagcaacggagatcccctgttagccccaaccaaggt
ccttttccacagagaaacacatacagtcaccagtctgtcatgaatagcaaggcttcttca
cctgcctcatcttcgggttggaataatcaccaaaatgccgcttggagcacagcctccaat
ccttggagcggtctccaggcaggcagggacccgcggagagctgtgggagtcggggttggt
gtgggggtcggtgtaggggtgccgtcttccatgaaccccatctccccgatgaaaaagcca
tattccagcaatgttatagcacccccaaaattcccgagagctggtcccctcaccccgaaa
tcttggatggaggacaacgcctttaggacggacaacagcaacaatatgttgccttttcag
gaccggaatcggccctttgatgcatttagcttgcactctttggagaattccttaatggat
atgataaggactgaccatgacaaaggtaaaccacacccagctggtggcccaccaatgact
atcgctgatattatatggaggaatcattttgcagggcgcatgggtctgaactttcaccac
cccggagcagatcacatcatgccattgaacaccaggagctatggccgcagaagaggtcgc
tcttcactctttccgttcgaggacggtttcctggacgacgggcacggtgacccctctctg
accccggggttgaactcgcccacgcgctgtcaaaacggagagaggatggagcgctactcc
aggaaggtgttcgtcggaggcctcccccctgacatagatgaagatgagatcaccaacagc
ttccgtcgctatggacacctggtggtggattggccccacaaagccgagagcaagtcctac
tttccacctaaaggctatgccttcttgctgttccaagaggagacctctgtccaggccctg
attgacgcctgcatcgaggaggacgggaagctttacctttgtgtctccagccccactatc
aaggacaaaccagttcaaatccgcccctggaacctgagtgacagtgactttgtgatggat
ggctcccaaccgctggacccccgcaagactatatttgtggggggtgtgccccggcctcta
cgcgcagtggaactagctatgatcatggacaggctgtatgggggtgtgtgctacgccggc
attgacactgacccggagctcaagtaccccaagggggcgggccgtgtggccttctccaat
cagcagagctacatcgccgccatcagcgcccgatttgttcagttgcagcacaacgacatt
gacaaacgggtggaggtgaagccgtacgtcttggacgatcagatgtgtgacgagtgccag
ggggcgcgctgtggggggaagtttgcccccttcttctgtgccaacgtcacctgcctgcag
tactactgtgagtactgctgggccagtatccactcccgggcgggccgagagttccacaag
ccactggtgaaggaggggggcgaccgccctcgacacgtgtccttccgctggagctga
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