Salvelinus sp. IW2-2015 (Arctic char): 111977745
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Entry
111977745 CDS
T05762
Name
(RefSeq) ran GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111977745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111977745
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111977745
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_NLRC3
LRR_6
LRR_CARMIL
LRR_TMOD-LMOD
LRR_4
LRR_NLRC4
Protamine-3
NamZ_N
Retinal
Motif
Other DBs
NCBI-GeneID:
111977745
NCBI-ProteinID:
XP_023863099
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Position
LG18:complement(62729442..62739188)
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AA seq
562 aa
AA seq
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MASDDIALLAEALSKTHVGYGELSYKGQGLKLDNTESVKELVREIEEYQGLRALRLEGNT
VGVEAAQAIAKALECKDQLQSCHWSDMFTGRLRSEIPTALRSLGSALMTAGARLRELDLS
DNAFGPDGVKGIETLLKSSACHSLQELRLNNCGMGIGGGKILAAALTECHEQSSALGAPL
KLKVFIAGRNRLENEGATALALAFQLMGSLEELHMPQNGINHAGVTALATAMQHNPHLRI
LNLNDNTFTKRGALAMAQALRHLRTVQVINFGDCLVRSEGAIALAAVLREGLPTLKELNL
SFGEITEAAALVLAQAVQDKPHMEKLDLNGNCLGEEGCEALKETMDNMDRADILASLSDD
EGEPDEDEEEEEEDEENGKEMKENGVKDKRDSPVKPEPTCHPEILSFLSSPTAETLLKLG
GNRTGLIQQHVDVSDSDKVADAFLRISSLYSDDHEVKKAVLETIDTLLKKAFSGSSLQTY
SFLSTLLVMLGLLKGEGKVKKVQVLPGHLLVLEHAVQQDYFPQDHASLLDTFVARHGKAL
KSCSHARDSLKSTLERRISPEC
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgatgacattgccctgctggccgaggcgctgtccaagactcatgtaggatat
ggagagttgagctacaagggccagggactgaagctggacaacacagagtctgtgaaggag
ttggtgcgggaaatagaggagtaccagggactccgggccctgcggttggagggaaacaca
gtgggagtggaggcagcgcaggctatcgccaaagccttggagtgcaaagaccaacttcag
agttgtcactggagtgatatgttcacgggtcgcttgcgctcggaaatcccaactgccctg
aggtccctgggcagtgcgttgatgacagcaggggccagattgcgagagcttgacctgagt
gataacgcctttgggccagatggggtaaagggcattgagactctactgaagagctctgcg
tgtcactctctacaggagctgagactcaacaactgtggcatgggcatcggagggggcaag
atcctggcggcagcgttgactgagtgtcatgaacagtccagtgctctcggtgccccactg
aaactgaaagtgttcatcgcaggcagaaaccgcttggagaacgaaggagccacagccctt
gccctggcatttcagctgatgggaagcctagaggagctgcacatgccccagaatgggatc
aaccatgctggggtgactgctctggccaccgccatgcagcacaacccccacctgcgcatc
ctcaacctcaacgacaacaccttcaccaagagaggggcgctggctatggctcaggctctg
aggcatctgaggactgtgcaggtgataaactttggggactgcctggtgcgttctgaaggg
gccatcgctctcgctgctgtcctgagagagggactgcccactcttaaggagctaaatctg
tcctttggggagatcacggaagctgcagcactggtgttggctcaggctgtacaagacaaa
ccccatatggaaaaactggatctcaatggtaactgtttgggggaggaggggtgtgaggct
ctgaaggagaccatggacaacatggacagggccgacatactggcatctctcagtgatgat
gagggagagcctgatgaagatgaggaggaggaggaagaagatgaggagaatggcaaagag
atgaaggagaatggagtgaaggataaaagagacagcccagtgaagcctgagccaacttgt
catccagagatcctctctttcctcagctcccccaccgctgagacactgctcaaactgggg
ggcaacaggactggactcatccagcaacacgtggatgtctctgactctgataaggttgcc
gatgccttcctgagaatctcctctctgtacagtgatgaccatgaggtcaagaaggctgtc
ctggagactattgacaccctgttgaagaaggcattctctggttcctccctgcagacctac
agcttcctgtccactctactggtgatgctggggctcctcaagggtgagggcaaggtgaag
aaggtgcaggtgttacctggtcacctgttggttttggagcacgctgtccaacaggactac
ttcccccaggaccacgcctccctgctggacacctttgtcgccaggcacggtaaagccctg
aagtcctgcagccatgcccgagatagtctcaagtccacactggagagaaggatctccccg
gaatgctga
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