Salvelinus sp. IW2-2015 (Arctic char): 111977757
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Entry
111977757 CDS
T05762
Symbol
med1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111977757 (med1)
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
111977757 (med1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
111977757
NCBI-ProteinID:
XP_023863122
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Position
LG18:16242292..16258872
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AA seq
1795 aa
AA seq
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MAAVSMQGCSPNPARELTLSTQSGGNQALVDRVKAEEGTEAEKQSRVNALLERLHAKHNA
SRPWQETSKVVRQAMEKRGQMNAAGHQLLLTCLETLQKALKVSSLPSMTDRLESIARQNM
LGSHLSPSGTECYITSDMFYVEVQLDTAGQLVDVKVAHHGENPASCPELIQHLRDKNFEE
FSKHLKGLVNLYKLPGDNKLKTKMYLALQSLELDLTKMMHMFRLATNANTVETILHGSVG
LLTARSGGHLVSLQCYVSPYDVFEERTGSQLNFTDTNVPRSLGVSVSVTVEGTSSIYKLP
IAPLITGSHPVDNKGTPSFSSVTNSNCVDLPASFFLKMNLPMPFSLSFIQRMGNATGIPV
FETPPTLSPLYELIVQSQLQEEGGNPLTTPTHAMRFYASLPDQQHCYFLNGEAPVQDGHS
LQGTLVSKIPFRHPAQVPALLDVIRHQAAANTLIGSCVKRTFIKDDTPGLLQFEVCPLTD
SSFSVSFQHPVNESLVCVVMEVIDSRQVSCKLYKGLSDALICTDDFITKVVQRCMSIPVT
MRAIRRKAETIQADTPALSLIAETVEIMVKKNLPPAGSPGYGMGTGVDPTNPMGLPGVGG
GNTPTGNSGGGNFAGPITSLFGISRSQSQGGECTPQGGAAGQQQQQQGGQSGDDFSKVTQ
NPILTSLLQITGAVGTSPTPQNSSSGLQPHQTPPPTSSPATNTKNHPMLMKLLKDNPAQD
FAALYGSSPLERQNSSSGSPRTDGMGGTCPGGGTKGKKKRPRGMEKGGVPGAGGGGMGGM
NKQQSGSMQPHHHQHQPTEDDFHRELFSMDVDASQNPIFEVNLPGDGLDTPHSITPAPSQ
CGTPPSGAGVSYHSQSHVQSQQQQQPPPGSSLPRMVRLSSSDSIGADINEILSDLPEQTG
KGGSGSHGQHHLGSGEDGGPLGTPHRDSSSSGQGSAVFEADIFNTNSNENPFTNAADLIA
EATATTPTSDSSSTNFFPDTVDFNPELLTSSHGFPQAYFDDSSPSADGDLDLVKGFGGSS
QQNTPSGTPQNPTPHGQSTPDPSLKDPFDISGIVFGGSGGGGKPLLGQALDLGDSHSSHM
GGGQSPLMMAMGGGSSDFKSGEAKAKQQQQGLXRTKDDNGGGSGRSSGMGMTGSSSTEGK
QVKRSRTPSSEGKSKDKPPKRKKLEPDGKSPSHSTGGRPYTPPSGGSGSGGSIGGGSKSP
GSSGRSQTPPGGATPPIPKITIQIPKGTLSGGKTSSHGGYTSSSSAGGGTGGAGSTSGSK
SHHSHSSSSSGKIKSKEGTLGQGISSKPGSVGGGVGGGPPQMKSSSQGMGVGKPGSSPIT
KHGLSGSGSSGGGVGSGNKMKPQGGKPPGSLMNPNIKPNISPSHSRPSGSDKLSSTMKMQ
QSQVPGTPPSSKAKSPMGSGGGGLVGSKSSSGGGMGSQKQLGGGGSSSGSSSSTSSSSSS
SSGSMPFSGGSQSQYGSSGGGGGGCGGGQGNNANNPNAKGKSPSRNKKPSLTAVIDKLKS
VGGGGGPEDEGEPPVGGSGGTGGGGPGGGPPNLGPSKHGMSSQGGEYPIKRDKSEKEGKS
KVSVSVGASGDKKLIDPKTGGVSSTGVAKIIISKPDGGSPSIKAKVTLQKPGESSGESMR
PQLSGLKASPLFSGSTPKHDRSSPSHSRSPGYTPLNHDSESESGSSSVAEKSHQNSPSSD
DDQAMRPVPPQDYMSSMPLSSGEKHKKHKKEKKKQKERERERDKDREREKKKSSSMSTGN
VSHGPMKADSWSRSPILASDTSLSMMGSDRPSRPSPVYMRNEDDDLMDSALTGNL
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtttctatgcagggctgtagcccaaacccagcaagagaacttaccctttca
acacaatctggggggaaccaggctcttgtagatcgggtaaaagctgaagaagggacagaa
gccgagaagcagagtcgcgtgaacgctctgttggagagactccatgccaaacacaatgcc
tcacggccttggcaggagaccagcaaggtggtgcgccaggctatggagaaacgtggtcag
atgaatgcggctggtcaccagctcctgctcacctgtctagagaccctgcagaaagcactg
aaagtgtcctccctgccctccatgacagatcgcttggagtccatcgctcgacagaacatg
ctggggtcccacctgagtccttcggggacagaatgttacatcacttcagacatgttctat
gtggaggtgcagctggacacggctggtcagctggtggatgtgaaggtggcccaccacgga
gagaacccagcgagctgtccggagctgattcaacacctgagggataagaactttgaagag
ttctccaaacatcttaagggcctagtcaacctgtacaagcttcctggagacaataagctg
aaaacaaagatgtacctggcacttcaatccctcgagctggatcttaccaagatgatgcac
atgttcaggttagccaccaacgctaacacggtcgagaccatccttcatgggagcgtgggc
ctgctgacagccaggagcggcggccatcttgtctccctccagtgctacgtgtccccgtac
gatgtgttcgaggaaaggacaggctcgcagctcaacttcaccgacacaaatgtccctcgc
tctctgggtgtgagtgtttctgtgacggtggaggggacctcgtcaatctacaagctaccc
atcgcccccctcatcacgggatctcacccagtggacaacaagggaaccccctccttctcg
tctgtgaccaactccaactgtgtggaccttcctgcttctttcttcctcaagatgaacctg
cccatgcccttctccctctccttcatccagaggatgggcaatgctacagggattcctgtg
tttgagacgccccccaccctgtcgcccctctacgagctcatcgtccagagtcaactccag
gaggagggggggaaccccctgaccacccccacacacgccatgcgcttctacgcttcgttg
cccgaccagcagcactgctacttcctgaatggcgargccccggtgcaggacgggcactcg
ctgcaggggacgctggtgtccaagatccccttccgccacccagcccaggtgcccgcccta
ctggatgttatcaggcaccaggcggccgccaacacgctgattggcagctgcgtcaagcgc
accttcatcaaggatgacactccaggactgctacagtttgaggtgtgtcctctgaccgac
tccagcttcagcgtctccttccagcaccctgttaacgagtccctagtctgtgtggttatg
gaggtgattgactccaggcaggtgtcctgtaagctgtacaaaggcctatccgatgccttg
atctgcactgacgattttatcaccaaagtggtccagaggtgcatgtccatccctgtcacc
atgcgggccatccggcggaaagcggagaccatccaggcagacacaccagccctctccctg
attgccgagacggtggagatcatggtyaaaaagaacttaccccctgctggaagccccggg
tacggcatgggcacaggggttgaccccackaaccccatggggctcccgggtgtcggtgga
ggcaacactcccaccgggaacagcgggggaggtaactttgccggcccaatcacatctctg
ttcgggataagtcgcagccaaagccaggggggagagtgtacaccccagggtggggcggct
ggacagcaacagcagcagcaggggggtcaatcaggggacgacttcagcaaagtgacccag
aatcccattctgaccagcttgctgcagatcacgggcgctgtgggcactagccccactccc
cagaacagctcttctggattgcaaccccaccagactccgcctcccacatcctcccctgcc
accaacaccaaaaaccaccccatgttaatgaarctgctgaaagacaaccccgcccaggac
tttgctgccctctatggctcgagtcccctagagaggcaaaactcttcctctgggtcgcca
cgcactgatggcatgggtggcacctgcccrggaggtggcaccaagggcaagaagaagcgt
cccagagggatggagaagggtggggtgcctggggcaggaggaggggggatgggagggatg
aacaagcagcagtcggggtccatgcagcctcaccaccaccagcaccagcccaccgaggat
gacttccaccgcgagctcttctccatggacgtggacgcctcccagaatcccatcttcgar
gtcaacctgcccggcgatggcttggacacgccccacagcatcaccccggcgcccagtcag
tgcgggaccccgccttccggcgccggagtgtcctaccactcgcagtcacacgtccagtcc
cagcaacagcagcaaccgcctccgggatcatccttgcctcgcatggtacgcctatcgagc
tccgacagcatcggcgcggacataaacgagatcttgtcggacttacccgagcagacgggt
aaaggcggcagcggatcgcacgggcagcaccacctgggcagcggggaggacggsggcccc
ttgggcaccccgcaccgggactcgtccagctcgggacagggcagcgccgtgttcgaggcg
gacatcttcaacaccaacagcaacgagaaccccttcacgaacgccgccgacctgatcgcc
gaggcgaccgccaccacccctactagcgactcctcgtccaccaacttcttccccgacacg
gtggacttcaaccccgagctgctgacctccagccacggcttcccccaggcctacttcgac
gacagctcacccagcgccgatggagacctagacctggtcaaaggcttcggtgggagcagc
cagcagaacacgccgtccggcaccccccagaaccccaccccgcacggccagagcaccccc
gacccctccctcaaggaccccttcgacatatcaggcatagtgttcgggggcagcggcgga
gggggcaagccactgctgggtcaggccctggatctaggggactcgcactcgtcccacatg
gggggaggccagagccctctcatgatggccatgggaggggggagcagtgacttcaagagc
ggcgaggccaaagccaaacagcagcagcagggacttktgaggacaaaggatgacaatggg
ggcgggagtgggcgcagctcagggatggggatgaccggcagcagctccactgaggggaag
caggtgaagcgaagccgcaccccctcgagcgagggcaagtccaaagacaagccccccaaa
cgcaaaaagctcgaacccgacgggaagtccccatctcacagcacaggggggcgaccctac
accccacccagcggaggctcgggatctggaggcagcattggcggaggatccaagtctccc
ggtagctccgggcggtcgcaaaccccaccaggaggtgccacaccacctatccctaagatc
accattcagattcccaaaggaacactgtctggtgggaaaacctcgtcccatggcgggtac
acctcaagcagttcggctggtggtggcactgggggtgcaggcagcactagcggaagcaag
agccatcattcccactcctcgtcttcctcaggcaagatcaagagtaaggagggcaccctg
ggccaaggcatcagctccaagcctgggagcgtgggaggaggtgttggaggtggacccccc
cagatgaagagctcttctcagggaatgggtgtggggaagccaggctcttctcccatcacc
aaacatggactctccgggtcgggaagcagtggtggcggggttggaagtgggaacaagatg
aagccgcaggggggcaagcctcccgggtccctcatgaaccccaacatcaagcccaacatt
tccccctcccactctcgccccagtggctctgacaagctctcttccaccatgaagatgcag
cagtcgcaagtccccggaactccgccgtcctccaaggccaagtcccccatgggctcaggg
ggcggcggcttggtagggtccaagtcgtcctccggcggggggatgggctcccagaagcag
ctgggcggtggtggttcctcttccggctcctcgtcttccacctcctcctccagctcctct
tcctctggctccatgccattttccggaggctcccagtctcagtatggctctagtggaggc
ggagggggtggttgtggtggcggacaagggaacaacgcgaacaaccccaacgccaaagga
aagtccccgagccgcaacaagaagccctcgctgaccgccgtcatagacaagctgaagagc
gtcggcgggggagggggtcctgaagatgagggcgaaccgcctgttggtggcagcggtggt
actggtggaggcggaccagggggcggaccaccaaacctcggcccctctaagcacggaatg
tcstctcaaggcggggagtacccgatcaaacgagataagtctgagaaagagggcaagtcc
aaagtgtctgtgtcggtgggcgccagcggggacaagaagctcatagatcccaaaactgga
ggcgtgagcagcacgggcgtggccaagatcattatcagcaagccggacggcggctcaccc
agcatcaaggccaaggtgaccctgcagaagcccggagagagctcgggggaatccatgcgc
ccccagctttccggtctcaaagcctcacccctgttcagcggctccacgcccaagcacgac
cgctcttcccccagccacagccgctcgccgggctacacgccgctcaaccacgacagcgag
agcgagtcaggcagcagctctgtggcagagaagtcccaccagaacagccctagctcggac
gacgaccaggccatgaggcccgtgcccccgcaggactacatgagctccatgccgctcagc
tccggggagaagcacaagaagcacaagaaggagaagaagaagcagaaggagagggaacgt
gagagggacaaagatagagagagggagaagaagaagtcgtcgtctatgtcaactgggaac
gtatcgcacggtcccatgaaggctgacagctggtcacggtcacccattttggcctcggat
acgtctctctctatgatgggctcggaccgtccctcccgccccagtcctgtctacatgcgg
aatgaggacgatgacctcatggactcggccctcactggcaacctataa
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