Salvelinus sp. IW2-2015 (Arctic char): 111977766
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Entry
111977766 CDS
T05762
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 2 isoform X1
KO
K21348
calcium-binding and coiled-coil domain-containing protein 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04137
Mitophagy - animal
salp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111977766
04137 Mitophagy - animal
111977766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111977766
03029 Mitochondrial biogenesis [BR:
salp03029
]
111977766
Membrane trafficking [BR:
salp04131
]
Autophagy
Xenophagy
Cargo receptors
111977766
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
111977766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKICH
CCDC39
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
111977766
NCBI-ProteinID:
XP_023863140
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All DBs
Position
LG18:10707975..10717188
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AA seq
651 aa
AA seq
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MESVESAANMELSTTFSQVVFQEIPHSYAPNIAVXCCYTLTAAIQQNPRDWVGIFKVGWR
TTKDYYTFVWIEPSLNLIKQDANRKQVLFNAYYLPKDDAEFYQFCYIDSNGQVRGASTPF
CFKTSGEQSTDGSLENDLLVITTQEKVEQREREKEEMVMELGQLKEQNEILRGVLKEQQQ
EIDCLKVCFQDLSNEELYKADGNLEXQQQKSKEHEQLTQKAKSMEDSHKXQEEQVVQSER
KIEELAMELGQLKEQNETLTRXLKEQQQEVDRLKESKEELAQVVSKLEQQQQNAREHEEL
TQNDKSMDESHTGQESLTPICEKYERALTKIKQLKKEREELKGKVEVQSVEIAQLSPRLR
DSEQESYRLKDNIQLLQVDLQSSEKEKAKLSVELRKLRGLTHDLEDLKTENKALHRSLSE
QGLQPQQEMVDSDLKVQYQALLGQLQEARTQLHQELQASNNTRRRAEQAEGELVKVNECT
NLIVKRSTQAEQKSSKLEMQLLEFHRVIEEKESMAEIAKVEKEELSRENQDLKRNVERLR
KEFADIQAAPVSMQHPNPYGSSTDPTPTEEQQQDTLAASLHFGNPYETPGPATNAEELSL
TCRHCHERFPGITPNELELHEESHRVCPFCTLICDGMEQTKYEEHVYSHEV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgtcgaaagtgcagccaacatggaattgtcaacaaccttttcccaggttgta
tttcaggaaatcccccactcatacgcgccaaatattgccgtgarttgctgctacactctg
acagcagccattcaacagaaccccagagactgggtggggatattcaaggtgggctggagr
accacaaaggattattacacatttgtgtggatagaaccatcattgaatctgataaaacag
gatgcaaacagaaaacaagtgctttttaatgcatactacttgccaaaggatgatgcagag
ttctatcagttctgctatattgatagcaacggccaagtgagaggagccagcaccccgttc
tgctttaaaacctcaggggaacaaagcacagacggcagcctggaaaacgacctcttggtc
atcacaacacaggaaaaggtagagcaacgtgagagggagaaagaagagatggtcatggag
ttggggcaactgaaagagcaaaatgagattttgagaggagtcctgaaggagcaacagcaa
gagattgattgcctcaaggtttgttttcaagacttgtctaacgaggaactatacaaggca
gacgggaacctggagkagcagcagcagaagtcaaaagagcatgaacaactgacacagaaa
gctaaatcaatggaagactcacacaaaygacaggaggaacaggtggtgcaaagtgagagg
aagatagaagagctggccatggagttggggcaactgaaagagcaaaatgagactctgaca
cgtgkcctaaaggagcaacagcaagaggttgaccgcctcaaggaatccaaagaggaactt
gcacaggtagtgagcaaactggagcaacagcaacagaatgctagagagcatgaagaactg
acacagaatgacaaatcaatggatgaatcacacacaggacaggagtctctgactcctatt
tgtgagaaatatgaacgagcattgaccaagatcaaacagctgaagaaggagcgagaggag
ttgaaaggaaaggttgaggttcaaagtgtggagattgcacagctgagcccaaggctcaga
gattctgagcaggagtcttacagactgaaggataacattcagcttctacaggtggatctc
cagagcagtgagaaagagaaggcgaagctttctgtggagctgcgcaaactgcgtggtctc
acacatgacctggaggacttgaagactgagaacaaggccttacacagaagcctgtcagag
caggggctccagccacagcaggagatggtggacagtgatttgaaggtgcaataccaagct
cttcttggccagctgcaggaggctcggacacagttgcaccaggagctgcaggcttccaac
aacacacgcagacgtgcagagcaagcagagggggaactggtgaaggtcaatgagtgcacg
aatctcatagtcaagaggtctacacaggcggagcagaaaagcagcaaactagagatgcaa
cttttagagttccacagagtcattgaggagaaagaaagcatggcagagatcgctaaagta
gagaaagaggagttgtccagagaaaatcaggatctcaaaagaaatgttgagagactccgc
aaggagtttgctgacatccaggctgctccagtgtccatgcagcatcccaacccttatggc
tcttcaactgaccccacccccactgaggagcagcagcaagatacactggctgcctctctc
cactttgggaacccttatgagaccccaggccctgcgacaaacgcggaggagttgtccttg
acgtgtcgtcactgccatgagcgcttccctggcatcaccccgaatgagctggagctgcac
gaggagagccacagagtgtgccccttttgcaccctcatctgtgacggaatggagcagacc
aaatatgaagaacacgtctacagccatgaggtgtag
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