Salvelinus sp. IW2-2015 (Arctic char): 111977866
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Entry
111977866 CDS
T05762
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04137
Mitophagy - animal
salp04144
Endocytosis
salp04145
Phagosome
salp04148
Efferocytosis
salp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111977866 (rab5c)
04145 Phagosome
111977866 (rab5c)
04137 Mitophagy - animal
111977866 (rab5c)
04148 Efferocytosis
111977866 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111977866 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111977866 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111977866 (rab5c)
04031 GTP-binding proteins [BR:
salp04031
]
111977866 (rab5c)
Membrane trafficking [BR:
salp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
111977866 (rab5c)
Endosome - Lysosome transport
111977866 (rab5c)
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111977866 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
111977866 (rab5c)
Exosomal proteins of colorectal cancer cells
111977866 (rab5c)
Exosomal proteins of bladder cancer cells
111977866 (rab5c)
GTP-binding proteins [BR:
salp04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
111977866 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
NBD_C
MCR_beta
Motif
Other DBs
NCBI-GeneID:
111977866
NCBI-ProteinID:
XP_023863390
LinkDB
All DBs
Position
LG18:16721339..16731453
Genome browser
AA seq
220 aa
AA seq
DB search
MAGRGGPARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNRDTFTRAKNWVKELQ
RQASPNIVIALAGNKADVANKRAVDLQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEAQGAAVAGGRARAGVDLQEPAPQGRSGQCCGGST
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcgtggaggaccggcgcgacccaacggcccggcggcaggcaacaagatctgc
cagttcaagctggtgctgctgggggaatcggcggtgggcaagtccagcctggtgctgcgc
ttcgtcaagggccagtttcaggagtaccaagagagcaccatcggagctgccttcctcaca
cagactgtctgcctggacgacacgacggtcaagtttgagatctgggacacggcaggccag
gagcgataccacagcctggcgcccatgtactacagaggagcccaggcggcaattgtggtc
tacgacatcaccaacagagacacttttacgcgagcaaagaactgggtgaaggagctgcag
agacaagccagccccaacatcgtcatcgctctggctgggaacaaggctgacgtcgccaac
aagagagccgttgatctccaggaagcacaggcctatgccgatgacaacagtctactgttc
atggagacttcagcgaagactgctatgaatgtcaacgaaatcttcatggccatagcaaag
aagctgcccaagaacgaggctcagggcgcagccgtagcagggggccgggcccgggcagga
gtggaccttcaggagcccgccccccagggccgcagcggccaatgctgtggcgggagcact
tag
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integrated database retrieval system