Salvelinus sp. IW2-2015 (Arctic char): 111977881
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Entry
111977881 CDS
T05762
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111977881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111977881
Membrane trafficking [BR:
salp04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
111977881
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Mer2
Laminin_II
GTP-bdg_N
DFF-C
Motif
Other DBs
NCBI-GeneID:
111977881
NCBI-ProteinID:
XP_023863412
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Position
LG18:8761032..8856246
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AA seq
264 aa
AA seq
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MSSDFEAYEQDFGTLTAEITNKIGRIPKLGGEEKTQLVLNVDKQLEEVRELMEQMDLEVR
ELPIQSRGMYQSRLKSYKGEMEKLEKDFKRSRIAYSDEVRNELLGEDAGSSESQLIKLRE
ERAHLLDNTEKLERSSRRLDAGYQIAVETEQVGQEILANLHTDREKIQRSRDRLRETDAN
LGKSSRILTGMLRRIIPEQSPGLRPRRHHPHHHHPGYLFQCARALISLILSLTHTHTHTL
THSHTHTHTHTPGVINSDKSIALE
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagattttgaagcctatgaacaggactttggaaccctgacagcagaaataacc
aacaaaattggaaggatccccaaattaggtggagaggagaagacacagctggttctaaat
gtcgacaaacagctcgaagaagtcagagagttgatggagcagatggatctggaggtgcgt
gagctccccatccagagcagaggcatgtaccagagcagactgaagagctataagggggag
atggagaagctggagaaagactttaaaaggtcacgtatcgcctacagtgatgaggtgcgg
aacgagctcctgggggaagacgctggctcctctgagagtcagttgatcaagttacgtgaa
gagagagcacatctgttggacaacacagagaagctggaaaggtcatctcggaggctggac
gcaggctaccagatagcagtggaaaccgaacaagtgggccaagagatcctggctaaccta
cacaccgaccgcgagaagatccagagatccagagatcggctgagagagacagacgccaac
ctgggcaagagctcccgcatcctaaccggcatgctgagaagaatcattccagaacagagt
cctggtcttcgtcctcggcgccatcatcctcatcaccatcatcctggctatctatttcaa
tgtgcgagggcactgatctccctaattctctctctcacacacacacacacacacacactc
actcactctcacacacacacacacacacacacaccaggcgtgattaatagcgacaaaagc
attgctctggagtaa
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