Salvelinus sp. IW2-2015 (Arctic char): 111977900
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Entry
111977900 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 2-like
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00310
Lysine degradation
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
111977900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111977900
03036 Chromosome and associated proteins [BR:
salp03036
]
111977900
Enzymes [BR:
salp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
111977900
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
111977900
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
111977900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
zf-C2H2_6
zf-C2HE
zf-C2H2_3rep
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
111977900
NCBI-ProteinID:
XP_023863470
LinkDB
All DBs
Position
LG1:52967909..52979900
Genome browser
AA seq
1754 aa
AA seq
DB search
MAVPGGTKEMLADIPCHVWKGLPDSMRLSCSAVDQSRIGVWASRLIPKGKRFGPFVGEKK
KRSQVSSNVYMWEVYFPARGWMCVDATDPMKGNWLRYVNWAHSTQEQNLFPMEINRAIYY
KVLRPIGPGEELLVWYNGEDNPEITAALEEERASNLNKKNSPRAKRARKLLERARQACLG
GFRGPKQTGGTKPIVTEMWDTEEGPNEEDERPSPSPGPSQGTRESSTMGSNSLSQAQFIS
AAMREKDEEEGDEEDPRDLQQRPSLITQSARSAESEDRSEQPDLPLSHSSPGEVGPGSLQ
TASSLPRPEPEADPYLDPDLEGDPHGEESHPCQHCERHFSTKQGLERHTHIHATANQHTH
TFKCRYCGKSLGSQVGRRRHERRHENGPNNNGQRPGSLAGTATLLXPLGQAXXSSPDCXT
VSGHXVVXGSPVPGGXMXSXZVVRKDPAAESEXPFIVDENGETKELHPCKYCNKAFGTHT
NMRRHQRRIHERHLLPKGVRRKGMLLQESPQQQQRLPEQSPSASPPPVYVPSADTEDEGD
REEYMVDISDNISENLSLYIDGKILSTSSVSGCEVIEVDSSSAALFGLDAVVISPNQISQ
AFKVDTRTCAVKQVSNLGQPTTKRRTSTPPLMPSLKMESENGSSSASSSSSTSSSSALLV
ESLFPQSSDSLAFQKEKTIYLSPKLKQLLQTQTDGQKPTIALIADSHRLAPPLSVASLPA
TSGRFKRRTASPPSSPQLSPALKADGCKSEAGVSSYTLKVPKLESLGMSSAWSLSSKEER
DTMSPSGKDGCSWSASRSGGNSCNQQPLDLSSGISKWSDGFNKTPREEVLDLSMSRKSTA
EPESKGSPAPTQPHTKKKKPNTSMLEKVLMNEYAGLNPAGEEGSCALGSPDSQYTASSGT
GTASHSPSSNMPFESADPSPPSLTPVTMNPSSPCVSSLTSPTPPPPVLPSMPSPDCPTSS
SLPLLSPKMSPRSIDHCEDESVCVSNSTTAETILAAVSNSYGDEEHVTKPVDPTHNTDPI
IGKALSNPSTESSSVSDVVPVSLSSAQSKPAKSGNHSFLDIQINPDLEPIITAGQGKSQC
SELPVLSPVKESPPTSSSTSPVGISDVPAPSVVSPASLSSTVIKEEVQHMDQLADLGLPP
GATVSSPPSAAAEKPSEEVVEEEGLEPDPFSKSFVCNVCEDPFRSIKELSRHIVEHAAEW
PYRCEFCVQLFGNAPALLEHRTALHGVGRIFVCSFCSKEFAFLCNLQQHHKDLHPSQPCT
HAAVESSKLRPQNYTDPARAKEESNPSSTTGPESSAEAASSQGVSDVKEEEQPDTNGKHE
EAGPEDPTEELYTTIKIMASEGGKPKGPDVRLGINQHYPSFKPPPFPYHNRTAAXSVASA
TNFTTHNXPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPKKNPIPLRQIV
KPQNGALSPASAANAGHTAFRRMGQPKRLNFNQEPPGKTKMSSLSKKKNQLVQKAITQRN
KTAATAKAPSQVKEEEPQEVHVCPHCSREFTYPASLSKHIAVSCPMKPVSKKAKKGAAAE
EATPAVDKNMSLRRRTTDSEIQQPETAEPVPKTLGKTRARTSGPGSAEAETPLPPGKGKT
AVTQVRTKRPASFPAATVSLNMKSKKGKVQSLPPTPLPSETPSDSAPLPATQTKQRMGKE
MPPKKVAEMKLPLQKPSQVPPKKEGERFSLRARERAGGPVTRSLQMANNVAPVEVKTEDL
SSQGPKETQESLLK
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atggcagttcctggagggacaaaggaaatgctcgctgacattccgtgccatgtgtggaag
ggcttgcccgatagcatgagactaagctgctctgctgttgatcaaagtcgtattggtgtc
tgggcctcgaggctgatccctaaaggcaagaggttcggcccgtttgtaggagagaagaaa
aagaggtcccaggtgtccagcaatgtttacatgtgggaggtgtattttccagccaggggc
tggatgtgtgtggatgctacagaccccatgaaggggaactggctacggtatgtaaactgg
gcacactccactcaagaacagaaccttttccccatggagatcaaccgagccatttactac
aaagtgttacggccaatcggacccggggaagagttgctggtgtggtacaatggggaagac
aaccctgagataacagctgcattagaggaagaaagagccagcaatctgaacaagaaaaat
tcacccagggcaaagcgagccagaaaactgttggagagagccagacaggcttgtttgggt
ggattccgtgggcccaaacaaacaggcggaaccaaacctattgtcacagagatgtgggat
acagaggaaggtccaaatgaggaggacgagagaccctccccatctccagggccttcacag
gggactcgggagagctccaccatggggagtaacagcctctctcaagcccagttcatctca
gcagcaatgagagagaaagatgaggaggagggtgatgaggaagacccaagggatctgcag
cagcggccgtcgctgataacgcagagtgctcggtctgctgagtcggaggataggagtgag
cagcctgatctgccactaagccatagcagcccaggtgaggtggggcctgggagccttcag
actgcctcatccctaccaaggcctgaaccagaggctgacccatacctcgaccctgacctt
gaaggtgacccccacggagaggagtcccatccctgccagcactgcgagcgccatttctcc
accaaacagggcttggagcgccacacacacatccatgccacrgcaaaccagcayacgcac
acyttcaaatgccgttactgtggcaagtccttrggctcgcaggtgggycgtcggcggcac
gagcggaggcatgagaacgggccaaayaacaayggccaaaggcctggctcactygctggg
actgctactttactcastcctctggggcaggctgyrmgttcsagcccagactgtyscact
gtctctggccactargttgtcamgggstccccmgtccctggaggacrtatgsygagccrt
saggttgtgaggaaggaccctgcggctgagagtgarcygccstttatcgtggatgagaat
ggwgagacaaaggagcttcatccttgcaagtactgtaataaggctttcggcactcacacc
aacatgcgcagacaccagcgcagaatccacgagcgccacttactgcccaagggtgtgcgc
aggaaaggcatgctgctgcaggagagcccgcaacagcagcagcgtctgcctgagcagtcc
cccagtgccagcccaccccctgtctatgtgcctagtgcagacactgaggatgagggggac
cgagaggagtacatggtcgacatatccgataacatctcggagaatctcagcctgtacatc
gacggcaagatcctgtccactagttcagtcagcggctgtgaagtgatcgaagtggactcc
agttctgcagcactgtttggtctcgatgcagtggtcatcagccccaatcagatcagtcag
gctttcaaagtggacaccaggacctgtgctgtgaagcaggtctccaacctcggccagccc
acgacgaaaaggagaacgtcgacacccccgctcatgcccagtcttaaaatggagtctgaa
aatgggtcctcctctgcctcctcttcctcctccacgtcttcctcatctgccttgttggtg
gaaagtctcttccctcagtcctcagactcattagcatttcaaaaggagaaaactatctat
ctgtctcctaagctcaaacagctcctccagactcagacagacggtcagaaacccaccatc
gccctgatagcagacagccacagattagctccccctctctccgttgcgtccctgcctgca
acctcaggcaggtttaagagaagaacggcttcccctccctcatctccacagctcagccct
gcgctgaaagcagatggctgtaagagcgaggctggggtctcgtcgtacaccctcaaggtg
ccaaagctggagagcctgggcatgtcctctgcctggagtctgtccagcaaggaggagagg
gacaccatgagtcccagcgggaaggacgggtgcagctggtctgcctctcggagcggaggg
aactcatgtaatcagcagcccttggacctttccagcggcatcagtaaatggagtgacggc
ttcaacaagacgcccagggaggaagtgctggatttaagcatgagtcggaagagtacagcg
gagccagagtccaagggaagtccagctccgacacagccccacaccaagaagaagaagccc
aataccagtatgctagagaaggtgttgatgaatgagtacgctggcttaaacccagcagga
gaggagggctcttgtgccctgggaagcccagattctcagtatactgcaagcagtggtaca
ggcacagcttctcacagtccctcttccaatatgccctttgaatcagccgatccctccccc
ccctctctaacccctgtcactatgaatccctcctccccctgcgtctccagcctcacctct
ccaactccacctccccctgtcctaccctctatgccctcaccagactgccccacttccagc
tctctccctctcctctcccctaaaatgtcccccagatccattgaccattgtgaggacgag
tcagtttgtgtatctaactctactacagcagagacaatattagctgcggtaagtaacagt
tatggagatgaggaacatgtcactaagccagtagaccccacccacaatacagatcccatt
atcgggaaagctttatcaaacccctctacagagtcctcctcagtatctgatgttgtccct
gtgagtctatcctcagcacaatctaaacctgctaagagtgggaaccacagtttcttagat
atccaaattaacccagacctggaaccgattattactgcgggacaggggaaatcccaatgc
tctgaactccctgttttatcacccgtaaaagaatccccccccacttcctcatcgacctct
cctgttggaatatcagatgtcccagctccgtcagtggtctccccagcatcactctctagc
actgtgattaaagaggaggtccagcacatggatcagctggctgatttaggccttcctcct
ggtgccacagtgtcttcacctccatctgctgctgctgaaaagccctctgaggaggtggtg
gaggaggagggattggagccagaccccttcagtaagagctttgtgtgtaacgtgtgtgag
gatccgttccgctccatcaaagagctcagtcggcacatcgtggagcacgccgctgagtgg
ccctacaggtgtgagttctgtgtgcagctgttcgggaatgcrccggccctgctggagcac
cgcacagccctccatggtgtgggacgcatctttgtctgctccttctgctccaaggagttc
gccttcctctgcaacctccagcagcaccacaaagacctgcatcccagccagccgtgcaca
cacgcagcggtggagagcagcaagctgaggccacagaattacacagacccagccagggcc
aaagaggagagtaacccctcctcaaccacagggcctgagtcctctgctgaagctgcctcc
tcccagggggtctctgatgtgaaggaggaggagcagcctgatactaacgggaagcatgaa
gaggctggaccggaggacccaactgaagagctctacactacaataaagatcatggcttct
gagggaggcaagcctaaaggcccagacgtacgcctgggcattaatcaacactaccccagt
ttcaagccaccccccttcccctaccacaaccgcacsgctgcagyctcygtggcctcggcc
accaacttcactacccacaacatkccccagacattcagcactgccatccgatgcaccaag
tgcggcaagagctttgataacatgcccgagctgcacaagcacatactagcctgtgccaac
gccagtgataagaggcggtacactcccaagaagaaccccatccctctcagacagatagtg
aagccccagaacggagctctgtcgcctgcctctgctgccaacgcagggcacaccgccttc
cgcagaatgggccaacccaagaggctgaacttcaaccaagaaccgcctggcaaaaccaag
atgagttccctcagtaagaagaagaaccagctggttcagaaggccatcactcagaggaat
aagactgctgctactgctaaggcccctagccaggttaaagaggaggagccgcaggaggtc
catgtgtgccctcactgcagtcgggagttcacttaccctgccagcctcagtaaacatata
gcagtcagctgtcccatgaagcctgtctctaaaaaggccaaaaagggagcagcagcagaa
gaggcaacaccagctgtagataaaaacatgagccttcgaaggagaaccacagactctgag
atccagcagccagagactgctgaaccggtgcccaaaaccctgggcaaaacacgcgctcgc
acttctggacccggctctgcggaggctgagaccccactgccgccaggtaaaggaaagacg
gctgtcacgcaggtgcgtaccaagaggccagcctctttccctgctgccacagtttctctc
aacatgaaaagtaaaaaaggcaaagttcaatcgttaccccccaccccgttaccctctgag
actcccagtgactctgcaccactgccagcaacccagacaaagcaacgcatgggcaaggaa
atgccgcccaagaaggtagcagagatgaaattgcccctacagaagccgtctcaggtgccg
cctaagaaagaaggggaacggttctctctgagagcgagggagcgagctggtgggccggtg
acacggagcctacagatggccaacaatgtagctcctgtggaggtgaaaacagaggacctc
tccagccagggacctaaagagacccaggagtccttgctgaaatga
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