Salvelinus sp. IW2-2015 (Arctic char): 111977901
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Entry
111977901 CDS
T05762
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111977901
03041 Spliceosome [BR:
salp03041
]
111977901
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111977901
Spliceosome [BR:
salp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111977901
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Nup35_RRM_2
RRM_Nup35
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
111977901
NCBI-ProteinID:
XP_023863445
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Position
LG18:complement(26670142..26689433)
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AA seq
409 aa
AA seq
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MEDESHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQ
SSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL
SPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLMRQT
FSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIECHIVKCYWGKESPDIAKS
VPQMEYGQGQWGQWSQMYGSPQAQQYGQQYMANGWQVPSYGVSYGQSWNQQGFGVEDSIL
AAAAQNLSSRQSQSPAWVGGFGSPAPSQPQTGPVMPNQGNFNMAGYQTQ
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaaagccaccccaaaaccctgtatgttggtaacctgtccagagatgtaaca
gaaattttgattcttcagctgttcacccaaattggaccttgcaaaagttgtaaaatgata
actgagcaacccgatagcaggaggatgaactcttctgtcggattttctgttttgcagcaa
tcaagcaatgacccgtattgctttgtggagttctttgaacatagagatgctgctgctgcc
ctagcagccatgaacgggaggaagatattgggaaaggaggtcaaagtaaattgggcaacc
actccaagtagccagaagaaagacacatctaatcacttccatgtatttgttggagacctg
agccctgagatcaccactgaggatatcaaagctgcatttgccccttttgggaaaatctcg
gatgctcgtgttgtgaaggacatgactacagggaaatctaaggggtatggatttgtgtcc
ttctataacaaactggatgcagagaatgccattgtgcacatggggggacagtggttaggg
ggacgccagataaggaccaactgggcaactcgcaagccacccgccccaaagaatgtgcaa
gacaatggctcgaagcagctgaggtttgaagatgtagtgaaccaatccagtccccagaac
tgcactgtgtactgtggaggaatccagtccggactatcagagcatctcatgcgtcagaca
ttttcgccctttggacaaatcatggaaataagagttttcccagagaaaggttactctttc
atcaggttctcctcccatgaaagtgctgcccatgcaattgtttctgtaaatggaacgtcc
atcgaatgccacatagtgaagtgctactggggcaaagaatcccccgacattgccaaaagc
gtaccacagatggagtatggtcagggtcagtggggacaatggagccaaatgtatgggagc
ccccaggcccagcagtatggacaacagtacatggcaaatggttggcaagtgccctcttat
ggagtgtcttatggacagtcttggaatcagcaaggatttggtgtagaggactccattctg
gctgcagcagcacagaacctttcaagcagacagtcccagtccccagcctgggttggaggg
tttggatccccggcaccgtcccagcctcagaccggtcctgtgatgcccaaccagggaaac
ttcaacatggctggctaccagacacagtga
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