KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111977912
Entry
111977912         CDS       T05762                                 
Name
(RefSeq) LIM domain-binding protein 3
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:salp00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111977912
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:salp04990]
    111977912
Domain-containing proteins not elsewhere classified [BR:salp04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   111977912
SSDB
Motif
Pfam: LIM PDZ DUF4749 PDZ_6
Other DBs
NCBI-GeneID: 111977912
NCBI-ProteinID: XP_023863460
LinkDB
Position
LG18:complement(32999937..33091159)
AA seq 863 aa
MSSYNISLSGPAPWGFRLQGGKDFNMPLTISRITPGSKAQQGNLVQGDIIVAIDGVSTEG
MTHLEAQNKIKCASFNLALTMQKYVPRTRTPGSKAQQGNLVQGDIIVAIDGVSTEGMTHL
EAQNKIKCASFNLALTMQKSKRPALQSATPRIDSPMQQIPHQKVIFNTPANNDYIPNFNP
NALKDTALSTHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQSQSKGHEGGSL
PVKDAQVDSASPVYQAVIKTADRDMELNDWARSSSQVQSKSFRLLAHITGTEFMQDPDVE
HLRKSREKFDTEFKGPRFAKLKNWHNGLSAQILNVPEKTLLYSVLCSEQPPPATQTQPVA
PEAPTVPSGAPRHLTHAASHISSALITQSRNKVYKQGPPPTSALEALSITPVFRTSTLPK
RKRTLPSGKPKHLSYSLQQSASGYSSQYKSSVSSQYGQAPPMQQAPPMYQGQSMYQGQSM
QQGPPMYQGPPMQQGPPMQQGPPMYQGPPMHQAPHMQQPPMQQPPHMQQPPHMQQPPHMQ
QPPHMQQPPHMQQSSIQIPVGPPPPKVVSTACIVPAPAPVPPQAAAPEPPSSRPPWITDD
SFANKFDPSKTTSTSMKVPALPQSAPPAPAYIPHPGSAHTPHSAPSPAYNPSPAPYNPTP
APFNPVARGVAQRAERFAANSNRAPLCGACNNMVRGPFLVALGRSWHPEEFNCHYCHTSL
ADCSFVEEQNAVYCENCYGEFFAPTCARCNTKIMGEVMHALRQTWHTTCFVCAACGKAFG
NSLFHMEDGEPYCEKDYISLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAVCNLNL
EGQPFYSKKDKPLCKKHAHAINV
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgagttcctacaacatttctctgagtgggccagccccgtggggcttccgattgcaggga
gggaaagacttcaacatgcccctgaccatctccaggatcacccctgggagcaaggcacag
caaggcaacctggtccagggtgacatcatcgtggccatcgacggagtcagcactgagggt
atgacccacctggaggcccagaacaagatcaagtgtgccagctttaacctggccctcacc
atgcagaagtatgtaccacgcacacgcacacctgggagcaaggcacagcaaggcaacctg
gtccagggtgacatcatcgtggccatcgacggagtcagcactgagggtatgacccacctg
gaggcccagaacaagatcaagtgtgccagctttaacctggccctcaccatgcagaagtca
aagcgcccagctttgcaaagtgccaccccaagaatcgactctcccatgcaacagatccct
caccagaaggttattttcaacacgcctgccaacaacgactacatccccaacttcaacccc
aatgcgctgaaggacactgccctgtccacccacaagcccatcgaggtgaagggtcctggg
ggcaaggccaccatcatccatgcccagtacaacacccccattagcatgtactcccaggac
gccatcatggacgccatcgccggacagtcccagtccaagggccacgagggcggttcactc
cctgtaaaagacgctcaggtagacagtgcctccccagtgtatcaggctgtcatcaagact
gcagacagggacatggagttgaatgactgggcccgcagctcctcccaggtgcagtccaag
tccttccgcctcctcgcccacatcacgggaacggagttcatgcaagacccagacgtggaa
catctgaggaaatcaagggaaaagtttgacaccgaatttaaaggcccacgttttgccaaa
ttgaaaaattggcacaacggcctgtctgctcaaatccttaacgtgccagaaaaaaccctg
ctctactctgtcctctgcagcgagcagccacccccagccacccagacacagccagtggcc
cctgaggcccctacagtcccctctggggcacctcgccacctgacgcatgcagcctcccat
atctcgtctgctttgattacacagtctagaaacaaggtttataagcaagggccaccgccc
acctctgcgctggaggctctgtcaatcaccccagtgttccgaaccagcactttgcccaaa
cgaaagcgcaccctgccctctgggaaacccaagcacctgagctacagcctgcaacagtct
gcctctggttacagctcccagtacaaatcctcagtctccagccaatatggccaggctccc
cccatgcaacaagcccctcccatgtaccaggggcaatccatgtaccaggggcaatccatg
cagcaggggcctcccatgtaccaagggcctcccatgcagcagggacctcccatgcagcag
ggacctcccatgtaccaggggccccccatgcaccaggccccgcatatgcagcaacctccc
atgcagcagcctccacacatgcagcagcctcctcacatgcagcagcctcctcacatgcag
cagcctcctcacatgcagcagcctcctcacatgcagcaaagctccatccagatccctgtg
ggccctcccccacccaaggtggtcagcaccgcctgcatcgtgccagctcctgcccctgtt
ccaccccaagccgccgcccctgaacccccctccagcaggcccccctggatcactgacgac
tcttttgccaacaagtttgaccccagcaagaccaccagcaccagcatgaaagtgcctgct
ctacctcagagtgccccaccagcaccggcctatatcccacaccctggctctgcccacacc
cctcactctgccccaagccctgcctataacccaagccctgccccctacaaccccacccct
gcccctttcaatcctgttgcccggggcgtggcccaaagggcggagcgcttcgctgccaac
agcaacagagcacccctctgtggagcctgcaacaacatggtcaggggacccttcctggtg
gccctgggtcgatcctggcacccagaggagttcaactgtcactactgccacacatcgctg
gcagactgcagctttgtggaggagcagaacgcagtgtactgtgagaactgctacggcgag
ttctttgcccccacctgtgcccgctgcaacaccaagatcatgggggaggtgatgcatgct
ctgcggcagacatggcacaccacctgctttgtgtgtgctgcctgtggcaaggcctttgga
aatagcctcttccacatggaggacggggagccctactgcgagaaagattacatttcactc
ttcagcaccaagtgccatggctgtgacttcccagtagaagctggagacaagtttattgaa
gcactgggtcatacctggcacgacacctgctttgtctgtgcggtgtgcaatttgaacctg
gagggccagcccttctactccaagaaggacaagcccctgtgcaagaagcacgctcacgcc
atcaacgtgtag

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