Salvelinus sp. IW2-2015 (Arctic char): 111977944
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Entry
111977944 CDS
T05762
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
111977944
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111977944
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
111977944
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
111977944
NCBI-ProteinID:
XP_023863479
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All DBs
Position
LG18:complement(49145971..49416379)
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AA seq
1403 aa
AA seq
DB search
MLAEPDATVLHGSGNSMMSRNIYHNKNQDSSISISKMDVIIPFSPDVPCDNNGQRMWWAF
LASSMVTFFGGLFIILLWRTLKYLWTVCCHCNTKKKEVQKVNNPANSQAADGTPKGPDEK
DEVVPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMFFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCPDPDAEDASNIM
RVISIKNYSPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELCYVKLK
LLLIAIENKSELGESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDD
ITDPKRIKKCGCKRLIYSKYKYNGYVRSPEGATTPGITGSQKETGVRFKADCNLVKDEVR
SSLQNRSIKIANCTSPPSTITSNAMRPQALPRPSLHQDPPVPQGEVTAVPLVNNRKGSLL
PPGVGLGFGPHGGFRLSISGPGRGDTAGRALAEQSRLNRARSLPVKYCYHPSNASLHGHS
SRACRLTPLAGCISPCQSLTPCTVTLRPSPACIRHDPLLIPGNEQMENMDMNVKQYDSTG
MFHWCPSKEIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHYHE
LKPIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNI
DDASLQDKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMDRSSPDSSPVHGLARQASV
TTGANIPIITELAKPGKILPLVSFSQEKNCGINIQMITELVNDSNVQFLDQDDDDDPDTE
LYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALLAEENALRGG
YSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHL
ATPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSHSSSKKSSS
VHSIPTTNRQNRSSKAREAGHKQNATRMNRMSQERKWFTDEPENAYPRNIQIKPMSTHMA
NQINQYKSTSSLIPPIREVEDEC
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgagccggatgccaccgttctccatggaagcggcaactctatgatgagtaga
aatatctatcataataaaaatcaggactcctcgatctctatatccaagatggacgtgatc
atccccttctcaccagacgtgccctgcgacaataatggccaacgcatgtggtgggcattc
cttgcctcctctatggtgacgtttttcgggggtctcttcatcattctcctttggaggacc
cttaaatacctgtggaccgtgtgctgccactgcaacaccaaaaagaaggaggttcagaag
gtgaataatcctgctaacagtcaggcagcagatgggacacctaagggtcctgatgagaag
gacgaagtggtacctgccagcgaggtggggtggatgacctctgtgaaggactgggccggg
gtcatgatatcagcacagacactcaccggcagagtcctggtcgtgctcgtctttgctctc
agcattggagcacttggaatatactttatagactcttctgatcccatagaatcctgtcag
aatttctacaaagatttcacgttacagatcgacatgttcttcaatgtcttcttccttctc
tactttgggctgcggttcatagcagccaatgataagctgtggttctggctggaggtcaac
tcagtggtggacttcttcactgttcctcctgtcttcgtatcggtctacttgaataggagc
tggctgggcttaagattcctgagagccttgagattgatacagttctcagaaattttacag
tttttgaatatcttaaaaacaagcaattccatcaagctggtgaacctgtgttccatcttc
ataagcacatggctaacagctgccggattcatacatttggtggaaaactcaggggatcct
tgggaaaacttccaaaattcccagtcactttcctattgggaatgtgtctacttgctcatg
gtcactatgtcaacagtgggctacggggatgtctatgcaaaaaccaccctgggacgcctg
ttcatggtcttcttcatccttgggggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcacattgtggtctgtggtcatataacgctcgaaagtgtctccaacttcctcaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacgccactttacccaagtggagttctaccag
ggatctgttctcaaccctcacgatctggcccgagtgaagattgagtcagcagacgcctgt
ctgattctggctaataaatactgtccagatcccgatgctgaagatgcctctaacatcatg
agggtcatctctatcaagaactattcccccaagatacgaattatcactcaaatgttacaa
taccataacaaggctcacctgctcaacattcctagctggaactggaaggagggtgatgat
gcgatctgtctagcagagctgaaggctggcttcatagctcagagctgtctggcccagggc
ctctccaccatgctggccaatctcttctccatgaggtctttcatcgagattgaagaggat
acgtggcagaagtactatttagaaggggtagctaatgagatgtacacagagtatctgtcc
agtgcctttgtggggctctccttcccagcagtctgtgagctgtgctacgtgaagctgaag
ctgttgcttatcgccatcgagaacaagtcggagctgggagagagcagaagccgaaagcgc
atcctcatcaacccggggaaccacgtaaagatgcaggaaggaactctggggttcttcatc
gccagtgacgccaaagaagtaaagagagcatttttctactgcaaagcttgtcacgacgac
atcacagaccccaaacggatcaaaaagtgcggctgcaaacgactgatttattccaaatat
aagtataatggatatgtcagatcaccagagggcgctacaacaccagggataacgggaagt
caaaaagagaccggcgttcggttcaaagcagattgcaatttagtgaaggatgaagttaga
tcatctttacaaaaccgatcgataaaaattgccaactgcacctcaccgccctccaccatc
acctctaatgccatgcgcccccaagcactgcctcgcccctccctccaccaggaccccccg
gtcccccagggagaggtcaccgccgtacccctcgttaataaccgtaaaggaagcctgctt
cctccaggggtggggctgggttttgggccccatggggggttccgcctcagtatctcaggc
cccggcaggggggacacggcgggcagggccctggccgaacagagcaggctgaaccgggcc
cgcagcctgccggtgaaatactgttaccaccccagtaacgcatctctgcacggccacagc
agcagggcctgtaggttgacccccttagcaggatgcatcagtccctgtcagtccctaaca
ccctgtactgtcaccctgcgtccgtcgcctgcctgcatcaggcatgaccctctactaatc
cctgggaacgagcagatggagaacatggacatgaatgtgaagcagtatgactccacggga
atgttccactggtgcccatctaaagagattgagaaggtcatcctgacccggagtgaggca
tccatgacggtgttgagcggccatgtagtggtctgtatatttggagatgtcacgtccgct
ctagtggggctgcgaaacttggtgatgcctttgagagccagcaacttccattatcacgag
ctgaagcccatagtgtttgtgggctcgctggagtacctgaggagagagtgggaaacccta
cacaacttccccaaggtctccatactacctggtacgccattaagtcgtgcagatttaagg
gctgtcaacatcaacctctgcgacatgtgcgtgatactgtcggccaatcagaacaatatc
gacgacgcctcgctgcaggataaggaatgcattctggcgtcgctcaacatcaagtctatg
cagtttgacgacagcatcgggctcttgcaggctaactcccaaggtttcacgcctcctgga
atggaccggtcatctccagacagcagtccagtacatggtttagcacgccaggcctccgtc
accactggcgccaacatccccatcatcactgaactagctaaacctggcaaaatactgcct
ttggtttcattcagtcaggaaaaaaactgtggaatcaacatacaaatgataactgagctg
gtgaacgactccaacgttcagttcctggaccaagatgatgatgatgacccggacacagag
ctgtacctgacacagcccttcgcctgcggaaccgccttcgctgtcagcgtgctggactct
ctcatgagtgcaacatacttcaacgataatatcctcaccctaatccggacgctggtgact
gggggagccaccccggagctagaggctctattggccgaagagaacgccctgcgagggggc
tacagcacgccacagacactggccaaccgagacaggtgtcgtgtagcccagctagccctc
tatgacgggccctttgccgacttgggggacggcggttgctatggagatttgttttgtaaa
gcgttgaagacgtacaacatgttgtgcttcggaatctacagattgagagacgctcacctc
gccacgcctagccagtgtaccaaacggtatgtgatcaccaaccctccgtatgagtttgag
ctggtccccacagacctgatcttctgcctgatgcagtttgaccacaacgcaggccagtcc
cgggccagcctctcccacagctctcactcctcccattcctccagcaaaaagagctcgtcc
gtccactccatccccaccaccaaccggcagaaccgcagcagcaaggcccgggaggccggc
cacaaacagaatgcaacaaggatgaatagaatgagccaagaaaggaaatggtttacagat
gaaccagaaaatgcctacccacggaacattcagatcaagcccatgagcactcacatggcc
aaccaaatcaaccaatacaaatccactagcagtctgattccaccaatcagagaagttgaa
gatgaatgctga
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integrated database retrieval system
