Salvelinus sp. IW2-2015 (Arctic char): 111977947
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Entry
111977947 CDS
T05762
Name
(RefSeq) uncharacterized protein LOC111977947
KO
K21882
PDZ domain-containing protein 7
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111977947
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111977947
Cilium and associated proteins [BR:
salp03037
]
Primary cilia and associated proteins
USH complex and associated proteins
111977947
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
111977947
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
111977947
NCBI-ProteinID:
XP_023863481
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Position
LG18:50275020..50325776
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AA seq
1119 aa
AA seq
DB search
MGERCAGTAWPRRMDSKATVADILAPAAGPEEVDDPVGMAKEGHLSGLKVTDLERRVPGV
DECGRGSRPLAMAHSSDYHNHREMTNGRGHPLPHPHNGGGYPHPHNHNGGDHPDSHPHNG
RGHPHSHNGGHGGQAGGSHSTNRYMQKKHHRHRGGRSSPMGRVILINSPVDGGDDCEDLH
TVTVDKSVDGRLGFSVRGGSEHGLSIFVSKIEDDSSAEQAGLCVGDKLVEVNGISLESIT
MSSAVKVLTGNNRLRMVVRRVGKVPGIRYSKEKTTWVDLIQRRMVVEESGRTPSDASSDS
VLRRMVHLYTTSDDYCLGFNIRGGKEFGLGIYVSKLDPGGLAEQHGIKMGDQILAANGVS
FDGITHSNAVEVLKSHTHIMLTIREAGRYPAYKEMVAEYSWLSKMANGGPPSSSQGSDSY
SSASSLSSTPLSSLSGLSQVLFPPAFGSDMVDVCISTEDRSRRTSSSERTAETAMQTDLH
PPLDSNAPHSPHGRLVAMETSRTLGATVILKDTPIRGKGEGPVERGGAGDGGRGKGGMLS
PGEQDVAQDSPKTAVLMALSRPRKPIRRSQSHITVTEDKQKKKKQGKEKSAGEREGSKTL
QRSKTFVSLLFKRDARRDMSRNRRERDTSRDSRETGTGDSHRGRFKSPSHHADKDPDKER
GRPFQLLTAPRETRAGVKDSSPLLHPETLGQVENMARKLLSQDEVTAVMRHCKRFMLACV
VEDLVHPLLAILDRPEKLLLIREIRMLIPPTEMGRFDSIVMPFELEAYDILKSRSCKNIK
NIRGSPVLRSPRSGPSRHLITPSPDYHGGFQLQPAKDLGRDRQLMEDLERLRVSGLQDGL
LPPSRAFTPLLDVPVDSYTHHTPRSRSPSPSPPNWLLTESSHTTRRQPQTNHSPHRRDNG
LSWPRHYDETSLLSEDTTPERGRLPVRNEHNGRVRRDQWEGGSERKGGMAEGYMEVRVHL
PPRNIQPTLAQVLEPPPKDRSPSTGRERGGQGQRGKVKQVNRLSPGRSQNGHHGNATPVA
IQEYEITTVTISKTKQSLGISISGGMESKVQPVIKIEKIFPGGAASTSDVLKAGYELVSV
DGESLQRVTHLHAVDVIRRAFSNKAKDSMVFIVKVPKGP
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagcggtgtgctgggacagcatggccgaggagaatggactcaaaggccactgtg
gcagacatcttggccccggccgctggaccggaggaagtggacgacccagttggaatggca
aaagaaggacatctttctggattaaaagtgactgatcttgaacggcgagtccctggtgtg
gatgagtgtgggagggggagtaggcctctcgccatggctcactcctctgactaccacaac
catagggaaatgaccaacgggcgaggacatcctctcccccaccctcacaatgggggaggc
taccctcacccccacaatcacaatgggggggaccaccccgactctcacccccacaatggg
agaggccaccctcactcccacaatgggggccatgggggccaggctggggggtcccactcg
acaaaccgctacatgcagaagaagcatcaccgccacaggggaggcaggtcctcacccatg
ggcagagtcatcctcatcaactctcctgtcgatggtggggatgactgtgaagacctccac
acagtgacagtagataagagtgtagacggccgtctgggattcagtgttagaggtggttca
gaacacggactcagcatcttcgtcagcaagatagaggatgacagctctgcagagcaggca
ggtctctgtgtaggggacaagctggtggaggtgaatggtatcagcctggaaagcatcact
atgagcagtgctgtgaaggtcctgacggggaacaacaggctgaggatggtggtgagacgt
gtggggaaagtccctggtatacgctactccaaggagaagactacatgggtggatctgatc
cagaggcgtatggtagtagaggagagtggtcgtactccttcagatgccagttcagacagt
gttctccgtaggatggttcacctctacacaacctcagacgactactgcctgggattcaac
atcagagggggcaaggagttcggactgggcatctacgtctctaagttggaccctgggggt
ctggcggagcagcatggcatcaagatgggcgaccagatcctggcggccaatggggtgagc
tttgatggcatcacccatagcaatgccgtggaagttctgaagagccacacccacatcatg
ctgaccatcagggaggcaggaagataccctgcatacaaagagatggtggctgaatacagc
tggctcagcaaaatggccaatggagggcctccgtcctcctcccagggatctgactcttac
tcctcggcctcctccctgtcttccacccccctcagctcccttagtggtctctcccaggtc
ctcttcccccccgcctttggctccgacatggtggacgtctgcatctccactgaggaccgc
tctcgccgcaccagcagctccgaacgcaccgcagagaccgccatgcagactgacctacac
ccccccttggactctaacgcaccccactcgcctcatggaaggctggttgccatggaaaca
agccggacgctaggcgccactgtgattttgaaggacacaccaattcgggggaaaggagag
ggtcctgtggaaaggggaggggctggagatgggggaaggggcaaaggggggatgttgtca
ccaggggaacaggacgtggcgcargactccccgaaaacggcggtgcttatggccctgagc
agaccgagaaagcccatcagacgatcccagagccatatcacagttacagaggacaagcag
aagaagaagaagcagggaaaggagaagagtgcaggagagagagagggcagcaagaccctg
cagcgctccaagaccttcgtcagcctccttttcaagagagatgcacggagagacatgtcc
aggaacagaagagagagagacacatcacgggacagtagagagacagggacaggggactcc
cacaggggtcgatttaaatcaccctcccaccatgctgacaaagatcccgataaagagagg
ggtcgtccattccagctgctgaccgctccaagggagacccgtgctggggtgaaggacagc
agccccctgcttcaccctgagaccctgggacaagtggagaacatggccaggaaactgctc
agtcaggacgaagtcacwgcagtcatgagacactgtaagcggtttatgttggcgtgtgtg
gtggaggatctagtacaccctctactggccatactggaccgacctgagaaactactactg
atacgagagatcaggatgctgatccctcctacagagatgggccgttttgacagtattgtc
atgccctttgaactggaggcctacgacatactgaagagccgctcatgtaagaacatcaaa
aatatccggggctctcctgtcctgcgctctcctcgcagtggaccctcacgacacctcatc
accccctctccagactaccatggtggtttccagcttcagccagccaaggacttggggaga
gaccgtcagctgatggaagacctagagagactacgtgtgtctggcctccaggatggtctc
ctgcccccttcccgtgctttcacccccctcttggatgtccccgtggacagctacacccac
cacaccccacgctcacgctctccgagcccctcaccccccaactggctcctcacagaatcc
tcacacactaccagacgccaaccccaaaccaaccactctccccataggcgagacaatggt
ttgtcctggccccggcactatgatgagacctcattgctgtcggaagataccactcctgag
cgggggcggttgccggtgaggaacgaacataatggaagggtcaggagggaccaatgggag
ggcggctctgagaggaagggagggatggccgaggggtatatggaggtgagagtacactta
ccccccaggaacattcaacccaccctggctcaggtgcttgagccccccccaaaggaccga
agcccctcgacagggagggagagggggggacaagggcagagagggaaggtgaagcaagtg
aacagactttcgccgggacggtcgcagaatggtcaccatggaaacgcaacacctgtagcc
attcaggagtatgagatcaccacggtgaccatctccaaaacgaaacagtctctgggtatc
agtatctcaggtgggatggagtccaaggtgcagcctgtgatcaagatagagaagatcttt
ccaggaggagctgcctctaccagtgatgttctgaaggctgggtatgagctggtgtcggtg
gacggtgagtctctgcagcgtgtgacccatcttcatgcggtggacgtaattcgccgggcg
ttcagcaacaaggccaaagactccatggtgttcatcgtcaaggtccccaaggggccctaa
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