Salvelinus sp. IW2-2015 (Arctic char): 111978013
Help
Entry
111978013 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member EDAR-like
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111978013
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
salp04050
]
111978013
Cytokine receptors [BR:
salp04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
111978013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
DUF4501
SCIMP
Psg1
Motif
Other DBs
NCBI-GeneID:
111978013
NCBI-ProteinID:
XP_023863539
LinkDB
All DBs
Position
LG2:30133185..30184593
Genome browser
AA seq
480 aa
AA seq
DB search
MFQKGSHIESLFLCLLLVSCPPCLRSEYSSCGEFEFYNQTFSSCWPCPPCQPGQEPHMNC
GYGTKDEDMCVCLVRREVLKGEYEICRRHKDVKVXVRATVLTPGTPDSDADCGPCLPGYY
IQENRPRNLYGMVCHSCQNAPRNTKECMLTKVPSVSTTSTTMFPHPHKDPTGQGHLATAL
IIAMSTIFIMAIAIVLIIMFYILKAKPSGQACCSGQVVKAVEAQTNKQEDKKDVPDNVVI
FSEKDEFDKLKPTPPKTVKSENDASSENEQLLSRSMDSDEEAALERQGAADPNPNLCLLN
LGNKPDLCLLSLGLLDRDKTGSNPTSPINANNISNGNANIINNNNYNKATGIQSRRKKIL
DLYARACSVAEGLSPTELPFDCLEKASRMLSSSYSSEAAVVKTWRHLAESFGLKRDEIGG
MSDGLQLFERISTAGYSIPDLLTRLVQIERLDAVESLCSDVLGGGDTHTVPLSSPRCASV
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaaaggaagtcatatagagtccctcttcctctgtttgttgttggtgtcctgt
cctccctgtctcaggtcagagtacagtagttgtggagagtttgagttctacaaccagacc
ttcagtagctgctggccctgccccccatgccagcctggacaggagccccacatgaactgt
ggctatgggactaaggatgaggacatgtgtgtgtgtcttgttcggcgggaagtactcaaa
ggggagtatgagatctgcaggagacataaggatgtgaaggtcnntgtacgcgctacagta
ctcacacctggaacaccagacagtgacgcagactgtggaccctgcttacctgggtattac
atccaggagaaccggcccaggaacctgtatgggatggtctgtcactcgtgtcagaacgca
ccgcgcaacactaaagagtgcatgcttaccaaagtccccagtgtctcaaccaccagtact
accatgttccctcaccctcacaaagaccccacaggacagggtcacctagcaaccgctctc
atcattgccatgtcaaccatcttcatcatggccatcgccatcgtcctcatcatcatgttc
tacatcctcaaagccaagcccagcggacaggcatgctgctcaggtcaggtggtgaaggct
gtggaggctcagaccaacaaacaggaggacaagaaagatgttccagacaacgttgtgatt
ttctctgaaaaggatgaattcgacaaactcaaacccacgcctccgaagacggtgaaaagt
gagaatgatgcatcgtcagagaacgagcagctgttgagtcgtagtatggacagtgatgag
gaggcagccttggagaggcagggggcggctgatcctaaccccaacctctgtcttctgaac
ctgggcaacaagccggacctctgcctgctctctctggggcttctcgacagggataagact
ggatccaaccccaccagccctatcaacgctaacaacattagcaatggcaatgctaacatc
atcaataacaacaactacaacaaggctacagggattcagagccggaggaagaagatcctg
gatctgtatgctagagcctgcagtgtggccgagggtctgagtcctacagaactaccgttt
gactgtctggagaaggccagtcgkatgctgagctcctcctacagtagcgaggcagctgtg
gtgaagacctggagacacctggcagaaagctttggcctgaagagggatgagatcggaggg
atgagtgacggcctgcagctgtttgagaggatcagtaccgccggctatagcatcccagac
ctgctcaccagactggtgcagatagagagactggatgctgtggagtcactgtgttctgat
gtactgggaggaggagatacacacactgtccctctgtcctcaccgcgctgtgcaagcgtc
tga
DBGET
integrated database retrieval system
