Salvelinus sp. IW2-2015 (Arctic char): 111978150
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Entry
111978150 CDS
T05762
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111978150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111978150
03012 Translation factors [BR:
salp03012
]
111978150
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111978150
Translation factors [BR:
salp03012
]
Eukaryotic type
Release factors
111978150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
111978150
NCBI-ProteinID:
XP_023863800
LinkDB
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Position
LG18:62980891..63000640
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AA seq
586 aa
AA seq
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MDPRDTAPDSWEQEEDAEARAAAGLQSALAALNVNAKPFVPNVNAAVFVPTFFQSSPTEI
PISDGHGADPVASMELSETVAPVENGGGTEADMMVEVETWEQKEEPGEGEPGGGGALGGE
GGSSEEVQGKEEEEMMEEEEEEELPMLKVIPLPPDAPKKEHVNVVFIGHVDAGKSTIGGQ
IMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKH
FTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVK
HLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIYFMPCSGLTGANLKEPI
EECTWYTGLPFIPHLDSLPSFNRITDGPVRLPIVDKYKDMGTVILGKLESGFIAKAQQLV
MMPNRHTVEVLSLLSDEVETDEAVPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTF
DAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVC
IARLRCAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcgagacacagccccggattcgtgggagcaggaggaggatgccgaggcccga
gccgccgcgggactccagtccgcactcgccgctctcaacgtcaatgccaagccgtttgtc
ccgaatgtcaacgcggcggtgtttgtaccgaccttctttcaaagcagccccacggaaatc
ccaatatccgacggtcacggtgctgacccagttgccagcatggagctgtcagaaacagtt
gctccagtggagaacggaggagggacagaagcagacatgatggtggaggtggagacgtgg
gagcagaaagaggagcccggggaaggagaaccaggaggagggggagccctgggaggagag
gggggttccagtgaggaggtgcagggaaaggaggaggaggagatgatggaagaggaagag
gaggaggagctgcccatgctcaaagtaatccccctcccaccagacgccccgaagaaggag
catgtcaatgtggtgttcatcgggcatgtggatgctggtaaatcaactattggaggtcag
atcatgtatttgacaggaatggtagagaaaagaacactggagaaatatgaaagagaagcc
aaagaaaagaacagagaaacatggtacctgtcctgggctctggacaccaaccaggaggag
agagacaaggggaagacggtggaggtggggagagcctactttgagacagagaaaaagcac
tttactatcctggatgcccccggccacaaaagctttgtccccaacatgatcggtggggcg
tcacaggctgacctggcagtgctggtgatctcggccagaaaaggagagtttgagacaggc
tttgagaaggggggtcagacgcgggagcacgccatgctggccaagacggctggagtcaaa
cacctcatcgtcctcgtcaacaagatggacgaccccactgtcaactggagcttggaaagg
tatgaggaatgtaaagagaagttggtgccatttctgaagaaggtgggcttcaacccaaag
aaggacatctacttcatgccttgctctgggctgacgggagccaacctgaaggagcccata
gaggagtgcacatggtacacggggttgccattcatcccacatctggacagcctgccaagc
ttcaacagaatcacagatggccctgtcagattacccatcgtagacaaatacaaggatatg
ggcactgtgatcctggggaagctggagtctgggttcattgccaaagcccagcagctggtc
atgatgcctaacaggcacacagtggaggtgctgagcctgctgtctgacgaggtggagaca
gatgaagctgttcctggagaaaacttgaagctaaggctgaagggcatcgaggaggaggag
atcctgcctggcttcatcctctgtaatgctgagaacctctgccactccggacgcactttt
gacgctcagattgtcatcattgagcataaatccatcatctgcccaggttacaacgcagtc
ctacacatccacacctgtattgaagaagtacaaatcacagccttaatctgtctagtggac
aagaagaccggtgagaagagcaagacgcgacctcgctttgtcaaacaggaccaggtgtgc
atcgcccggctacgttgtgctggaaccatctgccttgagaccttcaaagacttcccacag
atggggaggttcaccctacgagatgaaggcaaaaccattgctattggcaaagtgctgaag
ctggtaccagagaaggactaa
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