Salvelinus sp. IW2-2015 (Arctic char): 111978229
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Entry
111978229 CDS
T05762
Name
(RefSeq) ATP-binding cassette sub-family A member 5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111978229
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salp02000
]
111978229
Transporters [BR:
salp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
111978229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
111978229
NCBI-ProteinID:
XP_023863943
LinkDB
All DBs
Position
LG18:complement(56284361..56388435)
Genome browser
AA seq
1695 aa
AA seq
DB search
MYFIPIAPSCGERPHSCPRQLKHAGSNVSMQPNIIRRDAGVWHQTKSLLYKNLLIKWRTK
QQSLQELILPLLLLCLLILISTLNPHVYYGGISTMELEREDYHLLKGLGYTPINNATNHI
MEEVAQEMHLQDRLEMFSSEEDLENASLYEPSGYVGVVFMGSTPTSYRLRFPYNHLPLPS
DYTESIANCFASSVNCRAANYWYSGFIRLQTLIDAAIIQMQTKRSVWSEMDHLRVVMMGQ
PGSVEVQKFPHALISIYLVLAFTPFITFLIVNVAAEKEHRLKDTMTMMGLYDSAFWLSWG
LLYAALVTTMSILMSIIATYTALFPNSDFIVIFLLIFLYGISSIFFSFMLTPLFKKPKFA
STVGSMLTVVFGCLSLFTVLMKDFPQPLVWVLCLLSPSAFSIGIAQVVYLEAQGGGAVFA
TLANGPHPLYAPLLMLVLDCILYLLLAVYLDQVLPGEFGMRRSLVYFMKPSYWSKRSKRY
VEVSSVYETEVNGAPGVDESVEPVSPEFRGKEAIRINNIRKVYKEKDSIVEALRGLTFDI
YEGQITALLGHSGAGKSTLMNILCGICPPTDGHASIYGSPVAEIAEGAEMRQLVGICPQF
NIIFDVLTVEEHLRIFAAIKGILPSDIDNEVSKVLKDLDLEKIMDAQAKNLSGGQKRKLS
VGIAILGDPKILLLDEPTAGMDPCSRHQVWSLLKSRRAGRVTVLSTHYMDEADILADRKA
VISQGQLKCVGSSLYLKTKCGVGYHLRMSIGERCEVDGVTSLVKHHVPKAQLSRQQEAEL
TFTLPFESMDTFSGLFSELDCRPDLGISNYGVSMTTLEDVFLRLEAEAEVDQADYSVFNQ
EQVEDEGDASSLDDTDQRLLTFSDSKPEAVQGHALWRQQFSTVAWLHMLNMQRERKAFVY
TLALFLVFLAAVLVLSLATGNIQIHAPERQFVPIYLLRPNQAPRKYTTSLLVQNSSGSDI
SDFIRNLESQDIKVEMMKNTDYMSCAPHSAAINVTGSNKGFRYSVAFNSTTVHSLPMTVN
VLSNAILRGLNGTQHIQTWTKPFDYQIPDATSYALVYIEAIILGMLAAGMPAYFAMDHTR
DREIKCRSTLRISGLVPSAYWCGQAAVDIPFYYLILTTMTSILFSFHTANLLTSSNVTAV
ILCLIGFGPAMILFAYVVSFMFTRVQSNRDFFSVVSMMVCVVSASIVQLSFVNDNPGLTR
ILHNTLCFFNPLYPLMGCLNSITKATFLPSLYEEDFLWKNLLIAVLSPYLQCILLLFMLR
WLEIRYGGRTMKNDQFCRISSKTKAKVERNPEEGINEDEDVQMEKARVKEALTCQCCEEV
CVCGHYEKPVVVVSNLRKQYKCPREGISLKKRRTVATKNISFCVRKGEVLGLLGPNGAGK
STIMHMLSGDTVPTAGQVLMGDYSTEFRPVDNPLEHIGYCPQVSPLWPRITLEEHLEIYA
AIKGLQGQDVPGIITRVVNALELKGHLHKQAKNLSAGIKRKLCFALSMLGNPQIVLLDEP
SAGMDPKSKQRMWRAIRAAFKNRQRGAILTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQH
LKGKYGRGYSLEVKLREELTGLQQVALLHKEIRRIFPHAARQESFATLMVYKIPMEDVKS
LAKSFSQLESAKQAFNFEEYNFSQSTLEQVFMEFAKEQENEEEEVGSLSTTFQWQRLRQD
GPVPVNHTDSIVHQL
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcatacctatagcgcccagctgtggagaacgtcctcattcatgccccagacag
ttgaagcatgctggtagtaacgttagtatgcagcccaacataatcagaagagatgccgga
gtctggcatcaaacgaaaagcctgctttacaagaatctactcatcaaatggaggactaaa
caacagagtctgcaggagttgatcctgccgctgctgctgctgtgcctgctgattctgatc
agcaccctgaacccacatgtctactacggaggcatcagtaccatggagctggagagggag
gactaccacttactcaagggcctgggatacacccccattaacaatgccaccaatcacatc
atggaggaggtggcccaggaaatgcacttgcaggatcgcctggagatgttctctagtgaa
gaggatctggagaatgccagtctttatgagccctcaggctacgttggggtggtcttcatg
ggtagcacacccacctcttacaggttgcgcttcccttacaaccatctgcccctgcccagc
gactacactgaatctattgccaactgttttgccagctcagtgaactgcagagcagctaat
tactggtactctggcttcatccgcctccagactctcattgacgccgccatcatacagatg
cagaccaagcggtcagtgtggagtgagatggaccacctgcgtgtggtgatgatgggccag
ccagggtcagtggaggtccaaaagttcccccacgctctcatctccatctacctggtgctg
gctttcacacccttcatcaccttcctcatcgtcaacgtggcagcagagaaggaacacaga
ctcaaagacaccatgaccatgatgggcctctacgactctgccttctggctatcgtggggc
ctgctgtatgcagctctggtcaccaccatgtccatcctcatgtccatcatcgctacctat
acagccctcttccccaacagtgacttcatcgtcatcttcctcctcatcttcctctacggc
atctcctctatcttcttctccttcatgctgacccctctgtttaagaagcccaagtttgcc
agtacggtgggctcaatgctgactgtggttttcggctgcctgtccctgttcactgtcctg
atgaaggacttcccccagccgctggtctgggttctttgtctgctgtcccccagcgcattc
tccatcggcattgcccaggtggtgtacctggaggctcaggggggcggagctgtgtttgct
accctggccaacggcccccatcccctctacgccccccttctcatgctcgtcctggactgt
atactctacctgctgctggctgtctacctggaccaggttctaccaggtgagtttggcatg
cggcgctccctggtatacttcatgaagccatcctattggtccaagcgcagtaaacgctac
gtcgaggtgagctctgtgtacgagacagaggtgaacggggccccaggagtggatgagtct
gtcgagcccgtctctccggaattcagggggaaagaggccatccgcattaacaacatccgc
aaggtgtacaaagagaaggacagcatcgtggaagctctgaggggcttgacctttgacatc
tatgaaggtcagatcacagccctcctgggccacagcggagcggggaagtccactctgatg
aacatcctgtgtgggatctgccctccaaccgacggccacgcctccatctatggctcccct
gtggcagagatcgctgagggggcagagatgaggcagctggtgggcatctgccctcagttc
aacatcatctttgacgtgctgactgtagaagagcacctgaggatattcgctgccattaaa
gggattctgccctctgacattgacaatgaggtgtccaaggtgctgaaggatctagacctg
gagaagatcatggacgcccaggctaagaacctgagtggaggccagaagaggaaattgtct
gtgggcatagccatcctgggagaccccaagatcctgctcctggatgaacctactgctggt
atggacccctgttccagacaccaggtgtggtctctgctgaagagtcgcagagcaggcaga
gtcacggtgctcagcacacattacatggacgaggcagacatactcgctgaccgcaaagct
gtgatctctcagggccaacttaagtgtgttggttcttccctatatctcaagaccaagtgt
ggagtaggataccacctcagaatgtctattggtgaacggtgtgaggtggatggtgtcaca
tcattggtcaagcaccacgtccccaaggctcagttgtcacggcaacaagaggctgaactg
acattcaccctccctttcgaaagcatggacaccttttcaggattgttctcagaactagac
tgcaggccagacctgggcatcagcaactacggggtgtccatgacaacgctggaggacgtg
tttcttcgtctggaggctgaggctgaggtggaccaggctgactacagtgtgttcaaccag
gagcaggttgaggatgagggtgatgcatcctctctggacgacactgaccaaagactactg
accttctctgacagcaagccagaggcggtccagggccatgctctgtggagacagcagttc
agcaccgtggcctggctacacatgctcaacatgcagagagagaggaaggcctttgtctac
actctggcattgttcctggtcttcctagctgctgtgctagtattgtctctggctacgggg
aacatccagatccacgctccagaacggcagtttgtccccatctacctgctgagaccgaac
caggccccccggaaatacaccaccagtctactggtccagaactcatcaggctcggatatc
tccgacttcatccgtaacctggaatctcaggacatcaaggtggagatgatgaagaacaca
gactacatgtcctgtgctcctcacagcgcagccatcaacgtcaccggatccaacaagggt
ttcagatacagtgtagcgttcaacagtactaccgtccactctttgcccatgacagtcaac
gtcctcagtaacgccatcctacgaggtctcaacggcacacaacacatccaaacctggacc
aagcccttcgactatcaaattcccgacgccacgtcatatgctctggtctacattgaggct
atcatactggggatgctagctgcaggcatgcctgcctacttcgccatggaccacacccga
gacagagagataaagtgccgttcaacgctgcgtatctctggcctggtcccgtctgcgtac
tggtgtggtcaggctgcagtggacatccccttctactacctcatactgaccaccatgacc
agcatcctcttctccttccatactgccaacctgcttacctctagcaacgtcaccgcagtg
atcctgtgtctgataggttttggtccagctatgatcctgttcgcctacgtggtgtctttc
atgttcacacgcgtccagagtaacagagacttcttctctgtggtctccatgatggtgtgt
gtggtgtctgcctccatcgtccagctgtcatttgtgaacgacaaccccgggctgacgagg
atcctccacaatacactatgtttcttcaaccctctctaccctttaatgggctgccttaac
tctatcaccaaggccaccttcctgccctccctctatgaagaggacttcctctggaagaac
ctgctcattgctgtcctatctccctatctgcagtgcatcctgctgctgttcatgctgcgc
tggttggagatccgctacggagggaggaccatgaagaatgaccagttctgcaggatctct
tccaagactaaggctaaagtggagcgtaacccagaggaggggatcaatgaggatgaagat
gttcagatggaaaaggctcgggtgaaggaggccctcacctgccagtgctgtgaggaggtg
tgtgtgtgtggccattacgagaaaccagtagtggtggtgagtaacttgaggaagcagtat
aaatgtccaagggaaggaatctctctcaagaagaggaggacggtagccaccaagaacatc
tccttctgtgtacgcaaaggtgaggtgcttggactgctggggcccaacggagcagggaaa
agcaccatcatgcatatgttgtctggagacacagtcccaaccgctggacaggtcctgatg
ggggactacagtacagagttccgtccagtagacaaccccctggagcatataggctactgt
ccccaggtcagccctttgtggccccgcatcaccctggaggaacacctggagatctacgct
gccatcaagggcctccagggacaggacgtccctggcatcatcacacgtgtggtgaatgct
ctggagctgaagggccacctccacaagcaggcaaaaaacctctcagctgggatcaagagg
aagttgtgctttgctctcagcatgttggggaaccctcagatagttctgctggacgagcct
tctgcagggatggaccccaagtccaaacaacgcatgtggagggctatccgggcagcgttt
aagaaccgccagcgtggggccattctgacaactcactacatggaggaggctgaggctgtg
tgtgaccgcgtggccatcatggtgtcagggcagctcaggtgtattgggtctatccagcac
ctgaaggggaagtatgggcgtggctacagcctggaagtgaagctgagagaggagctgacg
gggctccaacaagtggcactgctccacaaggagatccgtcgaatcttccctcacgctgca
agacaggagagctttgccaccctgatggtttacaagatccccatggaggatgtcaagtca
ctggccaagtccttctctcagctagagagtgctaagcaagccttcaactttgaagagtac
aacttttcacaatcaaccttagagcaggtcttcatggagtttgctaaggagcaggagaac
gaggaggaagaggtgggttccctcagcaccacgttccagtggcagcggctccgccaggac
ggccctgtgcctgtcaaccacacagacagcattgtgcaccagctctga
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integrated database retrieval system
