KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111978248
Entry
111978248         CDS       T05762                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03010  Ribosome
salp04120  Ubiquitin mediated proteolysis
salp04137  Mitophagy - animal
salp04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    111978248
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111978248
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    111978248
   04137 Mitophagy - animal
    111978248
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:salp03011]
    111978248
   04121 Ubiquitin system [BR:salp04121]
    111978248
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:salp04147]
    111978248
Ribosome [BR:salp03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    111978248
  Archaea
    111978248
Ubiquitin system [BR:salp04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   111978248
Exosome [BR:salp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111978248
  Exosomal proteins of colorectal cancer cells
   111978248
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Dsc3_N IBR TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 111978248
NCBI-ProteinID: XP_023863967
LinkDB
Position
LG18:complement(45649962..45655650)
AA seq 156 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPAEECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagattttcgtcaaaaccctcacggggaagactataaccctcgaggttgagccttca
gacaccattgaaaatgtcaaggccaaaatccaagacaaagaaggtatccctcccgatcag
cagaggttgatcttcgctggtaagcagctggaggatggacgcacactgtccgactacaac
attcagaaggagtccactctgcatttggtgctgagactgcgtgggggtgccaagaaaagg
aagaagaagtcctacaccactcccaaaaagaacaagcacaagaggaagaaggtcaagctc
gcagtgctcaagtactacaaggttgatgaaaatggcaagatccaccgtctgcgtcgtgag
tgtccagctgaagagtgtggcgctggtgtgttcatggccagccacttcgataggcactac
tgtggcaagtgctgcctcacttactgcttcaacaagcctgaggacaagtaa

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