Salvelinus sp. IW2-2015 (Arctic char): 111978256
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Entry
111978256 CDS
T05762
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04520
Adherens junction
salp04810
Regulation of actin cytoskeleton
salp04820
Cytoskeleton in muscle cells
salp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111978256
04520 Adherens junction
111978256
09142 Cell motility
04820 Cytoskeleton in muscle cells
111978256
04810 Regulation of actin cytoskeleton
111978256
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
111978256
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111978256
04147 Exosome [BR:
salp04147
]
111978256
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
111978256
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111978256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
111978256
NCBI-ProteinID:
XP_023863978
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Position
LG18:58768183..58840304
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AA seq
1067 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKD
TVQTTEDQIMKRDMPPAFIKVETACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISGIKIFVTTKTSGSQGVEESLKNRNFTFEKMSAE
INEIIRVLQLTSWDEDSWANKKDTEAMKRALALIDSKMTQAKSWLGDPNAQQGEAGEQAI
RQILDEAGKVGELCAGXERRDILGTAKTLGQITDQVSEMRARGQGASPAAMQKAQQVSQG
LDILTGKVENAARKLEAMTNSKQVIAKKIDAAQNWLADPNGGPEGEENIRALLTEAKKIA
DMCEDPKERDDILRSIGEMAALTAKLSELRRQGRGDTPEARALAKQIATALQNLQSKTNK
AVANSRPAKAAVHLEGKIEQAQSWMENPTIDDGGVGQAAIRGLVAEGRRLANALPGPYRQ
ELLGKCEQVEQLMAQLANLAARGEGESPQARAVAQQLQETLKDLKEKMQEAMTHEVSDIF
SDTTTPIKLLAVASTAPSDAPNRDEVFDERAANFENHANKLGATAEKAAAVGTANKSTVE
GIQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLNASEEAIKKDLDKCRVAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REIVKAASDELSRTISPMVMDAKAVAGNITDPSLQKGFLDSGYRILGAVAIVRDAFQPQE
PDFPPPPPDLHQLHVSDEPAPPKPPLPEGEVPPPRPPPPEEKDEDFPEQVLGEMVSEPMM
MAARQLHEEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASD
EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQA
TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGLTLHWIRKTPWYQ
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttttcacactaaaacgatagaaagtatcctagagccggtggctcagcagata
tcccatctggtgataatgcacgaagaaggtgaggtggacgggaaagctatcccggatctc
accgcacccgtggctgccgtgcaggcggctgtcagcaacctggttcgggtggggaaagac
actgtccagactacygaggaccagataatgaagagagatatgcctccagctttcatcaag
gtggagactgcatgtaccaagctggtgcaggcagcatctatgttgaaagcagacccttac
tccgtccccgctcgagattacctcatcgacggctcccggggcatcctctctggcacatcg
gacctgctgctgaccttcgacgaggctgaggttcgtaaaataattcgtgtctgcaaaggt
atcctggagtacctaaccgtggcagaggtagtggaatctatggaggacctgatcacatac
acaaagaacctgggaccagggatgacaaagatggcaaagatgattgacgagcgacagcag
gagttgacccaccaggaacaccgcgtgatgctggtcaactccatgaacacagtcaaagag
ctgctgcctgtactcatctcaggtatcaagatctttgtaacgaccaagacgtccggcagc
cagggagtagaggagtctctgaagaacaggaacttcacctttgaaaagatgagcgctgag
atcaacgagatcattagggtgctgcagctcacttcctgggacgaagactcctgggccaat
aagaaggatacagaggccatgaagagagctctggcactcatcgactctaagatgacccag
gccaagagctggctgggggatcccaacgcccaacaaggggargcaggagaacaggccatc
cgtcagatcctggatgaggctgggaaggtgggagagctgtgtgctgggayggagcggagg
gatatcctgggcactgccaaaaccctgggscagatcactgaccaggtgtctgagatgagg
gccaggggtcagggggcatctcctgcagccatgcagaaggcccaacaggtctcccagggc
ctggacattctcacgggaaaggtggaaaatgcagcccggaaattggaggccatgaccaac
tccaaacaggtcatcgccaagaagatcgacgctgctcagaactggctcgcagaccccaac
ggtggtcctgagggagaagagaacatccgagccctcctgactgaggccaagaagatcgct
gacatgtgtgaagaccccaaggagagagatgacatcctgaggtccatcggagagatggct
gctctcaccgccaagctctctgagctccggagacagggtagaggagatactccggaggcc
agggcattggccaaacagatagccacggctctgcagaacctgcagtcgaagaccaacaag
gctgtagccaacagcaggcctgctaaggcagcagtccacctggaagggaagatagaacag
gcccagagctggatggagaaccctaccattgatgacggtggagtgggccaggcagctatc
cggggtctggtggcagagggtcgtcgtctggctaacgccctgccaggtccctatagacag
gagctgctggggaagtgtgagcaggtggaacagttgatggcccagctagccaacctggct
gccaggggcgagggagagtcgccacaagcacgtgccgtggctcagcagctccaggagacc
ctgaaggacctcaaagaaaagatgcaggaagctatgactcacgaagtgtcggacatcttc
agcgacacgaccactcccatcaaactactcgctgtggcctccaccgccccgtccgatgcc
cctaacagggacgaggtgtttgacgagagggcggccaactttgagaaccatgccaacaag
ctgggtgccacggcagaaaaggctgccgctgtaggaacagctaacaagagcactgtggag
gggatccaagctgccgtcaagtctacaagggacctgacaccacaggtagtctctgcagcc
cgtatccttctgagaaacccaggcaaccaggctgcatacgagcactttgagaccatgaag
aaccagtggattgacaatgtggagaaaatgacaggtttggtggacgaggccatagacacc
aagtctctgttgaatgcctctgaggaggccattaagaaagacctggataagtgtcgtgtg
gccatggctaaccaccagccccagatgttagtggcaggggcaactagcatcgcccggcgg
gccaaccggatcctcctggtggcgaaacgggaggtggagaactctgaggatcctaagttc
agagagatagtgaaggctgcatctgatgagctcagccggactatctctcccatggtgatg
gacgccaaggctgtggctgggaacatcacagatccaagtctgcagaagggcttcctggac
tcaggctatcgaatcctgggtgccgttgccattgtgagagatgcgttccagccacaggaa
ccagacttcccaccaccacctcctgatctgcatcagctgcacgtcagcgacgagcccgcc
ccacccaaaccccctctccccgagggtgaggttcctccccccagaccccctcccccagag
gagaaggacgaggacttcccagagcaggtgttgggagagatggtgagcgagcccatgatg
atggccgccaggcagctccacgaggaggcccgcaagtggtctagcaagggtaacgatatc
atcggtgcagccaagagaatggccctgctcatggctgagatgtcccgtctggtgcgcggt
ggcagcgggaacaagcgtgccctcattcagtgtgccaaagacatcgccaaggcctcagac
gaggtcacgaggctggccaaggaggtggccaagcagtgcacagacaaacgcatccggacc
aacctgctccaggtgtgtgagcggatccccaccattagcacacagctcaagatcctctcc
acagtcaaggccaccatgttgggtcgtaccaacatcagcgaggaggagtcagagcaggcc
acagagatgttggttcacaatgcccagaacctgatgcagtctgtgaaggagacggttagg
gaggccgaggctgcctccatcaagatccggacagatgcaggcttgactctccactggatc
cgtaagacaccctggtaccaataa
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