Salvelinus sp. IW2-2015 (Arctic char): 111978301
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Entry
111978301 CDS
T05762
Name
(RefSeq) RPE-retinal G protein-coupled receptor
KO
K04254
retinal G protein coupled receptor
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111978301
04030 G protein-coupled receptors [BR:
salp04030
]
111978301
Cilium and associated proteins [BR:
salp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
111978301
G protein-coupled receptors [BR:
salp04030
]
Rhodopsin family
Vision
Opsin
111978301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
DUF641
Motif
Other DBs
NCBI-GeneID:
111978301
NCBI-ProteinID:
XP_023864056
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All DBs
Position
LG18:384341..390280
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AA seq
296 aa
AA seq
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MAAYTLPEGFSDFDMFAFGSALLVGGLLGFFLNAISILAYISVKQMRTPSNFLVFNLAVA
DIMLNITGLIAAYASLFHSHWPWGQDGCSNHAFMGMTAVLASISFLATIAWDRYHQYVTN
QKLFWSTAWTISIITWGLAIFWAAVPLIGWGVYDFEPMRTCCTLDYTKGDKDYITYMGAL
TVFYLIFPAYVMKSNYDAIHAYFKKIHKHRWNTSLPLRVLLFCWGPYEIMCIYACFCNAR
LVSPKLRMLLPVLAKTNPIFNAWLYSFGNEFYRGGVWQFLTGQKFTEPVVVKLKGR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatacacattaccggagggattctccgattttgacatgtttgcattcggttca
gctcttcttgttgggggtcttcttggattcttcctcaacgccatttcaatattggcctat
attagcgtaaagcaaatgcgaactcccagtaatttccttgtgtttaacctggctgtggct
gacattatgctcaatataaccggcctgatcgctgcttacgccagcttatttcatagtcac
tggccctggggccaagacggatgtagcaaccacgccttcatggggatgacagcagttctg
gcctctatcagcttcctggctaccatcgcctgggacagatatcaccaatatgtcaccaat
cagaagctgttttggagcacggcctggactatttctatcataacctggggtttggctatc
ttctgggccgccgtccctctgattggttggggagtttatgactttgagcccatgaggacc
tgctgcactctagactacaccaaaggagacaaggactacattacctatatgggggccctg
actgtcttctaccttatcttccctgcttatgtcatgaagtccaactacgacgccattcac
gcatacttcaagaagatccacaagcacaggtggaacaccagtttaccactgagggttctg
ttgttctgctggggaccctacgaaatcatgtgtatctacgcctgcttttgcaacgccaga
ctggtctctccaaagctgagaatgttgcttcctgttttggcgaaaacgaaccctattttc
aacgcgtggctctattcctttgggaacgagttctacagaggaggggtgtggcagttcctg
actggccagaagtttactgagccggtcgttgtgaagttaaaaggaagataa
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