Salvelinus sp. IW2-2015 (Arctic char): 111978368
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Entry
111978368 CDS
T05762
Name
(RefSeq) tight junction-associated protein 1
KO
K06105
tight junction protein 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111978368
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GFIT
Motif
Pfam:
Pilt
ATG17_like
TPR
CALCOCO1
HIP1_clath_bdg
Bacillus_HBL
Med9
Prominin
DUF4200
OmpH
TPR_MLP1_2
VMAP-M1
BRE1B
betaPIX_CC
Uso1_p115_C
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
111978368
NCBI-ProteinID:
XP_023864156
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Position
LG18:complement(32084710..32230034)
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AA seq
700 aa
AA seq
DB search
MTSAAPARKPYRKAPPQHRETRNSLPLFREDLSGSTPPVHTAGPNLPDPCQDSLSDADRI
KILQQQNEDLRRRLSHTTHKMEAMETEFETSRHYMREEMGRTRDDLEKMRDKFRRLQNSY
TASQRANQDLEEKLHALLRKVERDKKTMDQEIVELTNKLLDAKNTIDKLEELNERYRQDC
NLAVQLLKCNKSHFRNHKFADLPYELQDMVNKHMKASLPGKSSQGAQGQDSDTMSLTPAD
VVPTSVIARVLEKPEPLVLNSAQSSSSAGRPQAEDVFVHVDMTGPQAGGGGRENGGPGHS
SRAPAQSSQAQELLQQNGMCRSQSSLSADGQSGEEGREGGAFEKLNPYPAPPPPHPLYPG
RKVIEFSSDDKVKIPKNSPLPNCTYATRQAISLSLVQNDEENERQRTVPNSPAVSDGGWR
SGTSSSSGGGGQRDPCRTPTQLDTADPLSNQSSPFSSPPQPPSAFASSGSSEEDLLANWQ
RMFVEKMAPSSEGTLVNRTSFSSETVKDLEGTRTSKPVGGGSDRGALRGAYSDGEEGSST
RSWTASRESSLDTDTSSMAELRTRRGHYGADFSTEEREQLLMALDPLDNDRDNTSGDTVS
TAITVETSPAEAKRNDFVDETESVGSSAEERDILPQDFPVIAPRVLAGLEDYTKNTTPLP
ANSSTSTPGRPLKSPKRMGVHHLHRKDSLTRAQEHGNLLD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgctgccccggccaggaagccgtaccgcaaggctccgcctcagcaccgcgag
acacgcaacagcctgcccttgtttcgagaggaccttagtgggagcacgccgcctgtccac
accgctggccccaacctgcctgacccctgccaggactccttatcagatgcagacaggatc
aagatcctgcagcagcagaatgaagacctgcgccggcggctctcccacaccacccacaag
atggaggccatggagacggagtttgagaccagccgccactacatgcgggaggagatgggt
cgcacccgcgacgacctggagaagatgagagacaagttccgcagactgcagaacagctac
actgcctcccagcgggccaaccaggacctggaggagaagcttcatgccctgctccgtaaa
gtggagagggacaagaagacaatggaccaggagatagtggagctcaccaacaaactcctg
gacgccaagaacaccattgacaagctggaggagttgaacgagcgctatcggcaagattgc
aatttggccgtgcagctnttgaagtgcaataagtcccatttcagaaaccacaagtttgca
gatctgccctatgagctgcaggacatggtgaacaagcacatgaaggccagtctgccgggt
aagagttcccagggggcccagggccaggactccgacaccatgagcctgacgcccgccgac
gtggtgcccacctcagtcattgcccgcgtcctggagaagcctgagcctctggtgctcaac
tctgcccagtccagcagcagcgcaggccggccccaggcagaggacgtgtttgtgcatgtg
gacatgactgggccccaggcaggaggagggggtagagagaacgggggtcccggtcacagc
agcagggccccagcccagagcagccaggcccaggagctcctccagcagaacggcatgtgt
cggagccagagcagcctgtcagcagacggccaatcaggagaggagggtagagagggtggt
gccttcgagaagctcaacccctacccagccccccctccgcctcaccccctctatcccggc
cgcaaggtgatcgagttctcctcggacgacaaggtgaagatccccaagaacagccccctg
cccaactgcacctacgcaacacgccaggccatctccctcagcctggtgcagaacgacgag
gagaacgagcgccagcgcaccgtgccaaacagccccgctgtgtcggacgggggctggcga
tccgggacgtcctcctcctcagggggaggggggcagcgtgacccctgccgtacccctact
cagctggacacagcagaccccctctccaatcagtccagccccttcagcagcccccctcag
ccccccagcgcctttgccagctcaggtagctccgaggaggacctgctggccaactggcag
cgcatgtttgtggagaagatggcaccatcctctgagggcaccctggtcaaccgcacctcc
ttcagcagcgagacagtcaaggacctggaggggacccggaccagcaagccagtgggcggg
ggttccgacaggggggcactacggggggcctactcggacggggaggaggggtcctccacc
cgcagctggacagcaagccgagagtccagcctggacactgacaccagcagcatggctgag
ctccgcaccaggagggggcattacggagcagacttctccacagaggagagagagcagctg
ctgatggccctggacccactggacaacgaccgagacaacaccagtggcgacaccgtgtca
acggccatcactgtggagaccagcccggcggaggccaaaaggaatgattttgtggacgag
actgagtctgtaggcagctctgcagaggagagagacatcctgccacaggacttccccgtc
atagccccccgggtcctggcagggctagaggactacacaaagaacaccactccccttccc
gcaaactcctccacttccacccccggccgacccctgaagagcccaaagaggatgggagtc
caccacctgcaccgcaaagacagcctgacccgggcacaggagcatggtaacctgctggac
tga
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