Salvelinus sp. IW2-2015 (Arctic char): 111978451
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Entry
111978451 CDS
T05762
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04514
Cell adhesion molecule (CAM) interaction
salp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111978451
04517 IgSF CAM signaling
111978451
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111978451
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
NGL family
111978451
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
VEGFR1-3_N_Ig-like
Ig_2
LRRNT
DUF7617
Ig_6
Motif
Other DBs
NCBI-GeneID:
111978451
NCBI-ProteinID:
XP_023864291
LinkDB
All DBs
Position
LG18:15052736..15055936
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AA seq
752 aa
AA seq
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MRVVMVTSPSTPSPLLWLVQLLLWLHHHGPQVTEAAPPCPNPCSCSNQASRVICTRKSLV
EVPDSISVNTRYLNLQENTIEVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLDYI
SEAAFEGLFNLRFLNLGMCGLKEIPNLTPLVRLEELELSGNQLGNVRPGSFQGLVSLRKL
WLMHSKVTVIERNAFDDLKNLEELNLSHNTLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSTSDSSNPFSYFTTVTVETVETNNGEDSAARQYINETYVPPDYLG
PTVSGGVLGKGRAGFTISPSRSSLSSLSPRATRATEKAVTVSIMEVTNIPGLDDVMKTTK
IIIGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPTRAIEIINVEDEMGAGAGSGISGGS
TMQSGCGGDGTLRMHHPEIVNLPNIGRSEHLNHYYKANHFNNNVMGLSIGTGAGISTLSN
KNNPSPLNQXGQDIPISCTQVPISSTTFQTMSGNGANTNPLSVSPPLPMSLPMSPMGLHG
SIKGFMGQNQNPQMEPLLFKGNSKENVQETQI
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctccaccccttcccccctcctctggttggtccag
cttttactgtggctccaycaccatggacctcaggtaacagaggccgcgcccccatgtcca
aacccctgtagctgctccaatcaggcaagccgagtcatctgtacaaggaagagtttggtg
gaagtaccggacagtatttctgtgaacacaagataccttaacctacaagagaacacgatt
gaggtgataaagtctgacacattcaagcacctgcggcatttggaaatcctgcagctttcc
aagaaccacatccgacaaatcgaggtgggcgcgttcaatggcctgcccaacctcaatacc
ctggagctcttcgacaaccgtctcacactggtaccgtcgcaggcctttgagtacctcagc
aagctgcgggagctctggctacggaacaaccccatcgagacactgccggcgtacgctttc
caccgcgttccctccctgcgccgtctcgacctgggcgaactacggaagttggactacatc
tctgaggccgccttcgarggcctgttcaacttgcgtttcctgaacctgggcatgtgcggt
ctgaaggaaatccccaacctcacacccttggtccgactggaggagctagagctgtctggg
aaccagctggggaatgtccgtcccggctcgttccaaggcctggtgtcgctgcgcaaactg
tggctcatgcactccaaggtgacggtcattgagcgcaatgccttcgacgacctgaagaac
ctcgaggaactcaacctgtcccacaacaccttgcactcgctgccccacgatctcttcacc
ccgctgcaccagytggagcgggtgcacctcaaccacaacccctgggtgtgcaactgtgac
gtgctgtggctcagctggtggctgaaggagacggtgcccagtaacacaacatgctgtgcc
cgctgccacgcgcccccaggcctgaagggccggtacattggtgagctggaccagagccac
ttcacatgctaygctcccgtcattgtagagccacccactgacctcaatgtcacagagggc
atggctgccgagctgaagtgtcgcactggcacctccatgacgtctgtcaactggctcacc
ccaaatggcaccctcatgacgcatgggtcgtatcgcgtcaggatctcagtccttcacgat
ggaactctgaatttcaccaatgtgactgtgcaggacacgggccaatacacctgcatggtg
accaactccgccggcaacactacggcaaccgcagtgctcaacgtgtctacctccgactcc
agcaaccctttcagctacttcaccaccgtcactgtggaaaccgtggaaactaacaatggg
gaggattccgctgcaaggcagtacatcaacgaaacctacgtaccgccagattacctgggt
cccactgtttcaggaggggtactgggtaaaggcagggctggattcaccatatctccatct
cgctcatctctctcctctctgtcaccgcgagccaccagagccactgaaaaggcagtcaca
gtgtcgataatggaggtcacraacatccctggcctggacgacgtgatgaagaccaccaag
atcatcattggctgcttcgtggccatcaccttcatggcggccgtgatgctggtggtcttc
tacaagctgaggaagcagcaccagctgcacaagcaccatggccccacccgcgccatcgag
atcatcaacgtggaggatgagatgggtgccggggccgggagcggcatctcagggggatcg
accatgcaatctgggtgcggaggagacggaaccttgaggatgcatcacccggaaatagtc
aaccttcccaacatcgggcgatcagagcatcttaaccattactacaaggccaatcatttc
aacaacaacgtgatgggtttgagcattgggacaggggcaggcatcagtactctaagcaac
aagaacaacccgtccccactgaaccagcawggccaggatatccccatytcctgtacacag
gttccaatytcctcaaccactttccagaccatgtccggaaatggtgccaacaccaaccct
ctttctgtttccccacctctgccgatgtccctccccatgtcccccatgggattacacgga
tcgatcaagggtttcatgggccagaaccagaatccacaaatggagcctcttttgttcaag
ggaaactcaaaggaaaacgttcaagagactcaaatctga
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