Salvelinus sp. IW2-2015 (Arctic char): 111978636
Help
Entry
111978636 CDS
T05762
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
salp03009
]
111978636 (nop2)
Enzymes [BR:
salp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
111978636 (nop2)
Ribosome biogenesis [BR:
salp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111978636 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
111978636
NCBI-ProteinID:
XP_023864583
LinkDB
All DBs
Position
LG18:complement(52352420..52358795)
Genome browser
AA seq
744 aa
AA seq
DB search
MGRKLDPTTYVKKGPGRKSRKQKGAETELAKFLTDEDTAPKRLSSRSRKRAGKRAQVTKK
PKETIEKEEPKKGFTDENSEWLKPAKRKREVGQSDNEEDSDSQWEQEEDEGQEGAENSKG
KKLLIEGDGDDDDDLVDDYGALEDSSEGEELLPIERAARKQKKLQEAMGQESDDDDDDDD
NDDKGKSGDEDMGEDDTVQANLDEMDKFILPGAEEIAKEGVLLVDLQTIHQRIKDNVDVL
SHFATKREEGKERTEYLSLLKKDLSTYYSYNNFLIDKLLDIFPVSELIDFLEANEIQRPV
TIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIGATPEYLAGHYMLQG
ASSFLPVMALSPQEGETVLDMSSAPGGKTTYMAQLMRNTGVIVANDASADRLKSVVGNIH
RLGVTNSMICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPAVKTSKDESDIQRLAHL
QKELILAAIDSVNAESPSGGYVVYCTCSIMVEENEWVVDYALKKRNVKLVQTGLDFGKEG
FTRFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFSNTVPTTAVDKDGEEETEPSEAV
EVTADSSDEDGPPKAGSKNKSKKQKPVPGKPAVSQKATANGKLAKSIGKKTTNPSTLKKS
EKPTGPKKAKIAKMDGGTVKVDGELKKSNTVKTEGETTKESKEGSRFEKKGDXQRKSPMQ
SKKRMGKNKFNKLKKLLKKEEVGQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggatcccaccacttatgtgaagaaggggccggggcggaagtccagg
aagcagaaaggagcagagactgagctggccaagttcttaacggatgaggatactgcacca
aaacgactgtcaagcaggtccaggaaaagagctgggaagcgagctcaagtgaccaaaaag
cccaaggaaaccattgagaaggaggagccaaaaaaaggattcacagatgaaaatagtgaa
tggctgaagccagcaaagaggaagcgtgaggtcggccaatcagataacgaggaagacagt
gacagccaatgggagcaggaagaggacgaggggcaagagggagcggagaacagtaaaggg
aaaaaactgctaattgagggagatggtgatgatgatgatgacctggttgatgactacggt
gcattggaggacagcagtgaaggagaggagctgctccccatcgagcgagctgccaggaag
cagaagaagctgcaggaagccatgggccaggagagtgatgatgatgatgatgatgatgat
aatgatgataaggggaagagtggagatgaagacatgggtgaagatgacacggtacaggct
aatttagatgagatggacaaattcatactacctggagcagaggagatagcaaaagagggc
gttttgcttgtagacctgcagaccatccaccagagaataaaggacaacgtggatgttctc
tctcactttgcaaccaagagrgaggaggggaaagagagaacagagtacctctctctcctc
aaaaaggatctttccacttactacagctacaacaatttcctcatwgacaaactgctggat
atcttcccagtgtcagagctgattgatttcctggaggccaatgaaattcagcgacctgtc
accattcggaccaatacactgaagacaaggaggagggacttggctcaggccctgatcaac
agaggggtgaatttggatcctctggggaagtggtctaaagtgggcctggtcatttttgac
tcctcggtacccataggtgcgaccccagagtacctagctggtcactacatgctgcaggga
gcctccagcttcctgcctgtcatggctctctctccacaggagggggagactgtgctcgac
atgagctcagctcccgggggaaagacaacctatatggcccagttgatgaggaacacagga
gtgattgtggccaatgatgccagtgctgacagactgaagagtgtggtgggcaacatccac
cgtctgggagtcaccaactcaatgatctgtaactacgacgggaggcagttccctaaggta
atgggtgggtttgacagagtgctgcttgatgctccctgctcaggcacaggagtaatctcc
aaagaccctgctgtgaagaccagtaaagacgagtctgacatccagcggttggcccacctg
cagaaggagctcatcctggcggccatcgactcggtcaatgctgagtctccctctggaggc
tatgtggtgtactgcacatgctctatcatggtggaggagaacgagtgggtagtggactat
gctctcaagaaaagaaacgtcaaactcgtccagactggactggactttggcaaagaaggt
ttcaccagattcaaagagagacgattccatccctctctgaaactctcacgccggttctat
cctcattcccacaacatggacggtttctttgtggccaagctgaaaaagttctccaacacg
gtcccaaccacagcagttgacaaagacggagaagaggaaaccgagccatctgaggcagta
gaggttacagctgattcctctgatgaggacgggccacctaaagcagggtctaagaacaag
tccaagaagcagaagccagtccctggcaagccagctgtgtcacagaaggccacagccaac
gggaagctagccaaaagcatcggcaagaaaacaacaaacccaagcaccttgaaaaagagt
gagaaaccaaccgggccgaaaaaggcaaagatcgctaagatggatggtgggactgtgaaa
gtggacggagagctcaagaagtccaacacagtcaaaacagaaggggagacgaccaaagag
tcaaaggaagggagcaggtttgagaaaaagggcgataawcagaggaaatcccccatgcag
agcaagaagagaatggggaagaacaaattcaataagttgaagaagctgctgaaaaaagaa
gaggttggacaatga
DBGET
integrated database retrieval system
