Salvelinus sp. IW2-2015 (Arctic char): 111978716
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Entry
111978716 CDS
T05762
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 3 isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111978716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111978716
Membrane trafficking [BR:
salp04131
]
Autophagy
Other autophagy associated proteins
Others
111978716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_Vps41
BCAS3_WD40
WD40_Prp19
ANAPC4_WD40
Beta-prop_IFT122_2nd
WD40
Beta-prop_HPS5
WDR55
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_IFT140_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_DCAF12
DUF5711
Motif
Other DBs
NCBI-GeneID:
111978716
NCBI-ProteinID:
XP_023864700
LinkDB
All DBs
Position
LG18:complement(1287429..1301852)
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AA seq
344 aa
AA seq
DB search
MNLLPSNAHGNGLLYAGFNQDHGCFACGMENGFRVYNADPLKEKEKQEFMEGGVSHVEML
FRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMI
KVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHSGHVQIVDLANTEKPPVD
IPAHEGALCCIALNLQGTRIATASEKGTLIRIFDTMAGHLIQELRRGSQAANIYCINFNQ
DASLICLSSDHGTVHIFAAEDPKRNKQSSLASASFLPKYFSSKWSFSKFQVPSNSPCVCA
FGTEPNSVIAICADGSYYKFLFNPKGECSRDVYAQFLEMTDEKI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaatttactaccatcaaatgcacatgggaacggactcttgtacgcgggattcaaccag
gatcatggatgctttgcttgcggaatggagaatgggtttagggtgtacaacgcagaccca
ctcaaagagaaagaaaaacaagagttcatggagggcggggtcagccatgtggagatgctg
ttcaggtgtaactacctagcgctggtcggaggagggaagaagcccaaatacccacctaac
aaagtgatgatctgggatgacctgaagaaaaagacggttatagaaattgagttctccacg
gaggtgaaagcagtgaagcttcgaagggacaggatcgttgtggtcctggactcaatgatc
aaagtgttcacgtttacccacaaccctcatcagctgcatgtgtttgagacctgctataac
ccaaaaggtctgtgtgtactgtgtcccaacagtaacaactctctcctggcgttcccgggc
acccactctgggcatgtgcagatcgtggacctggccaacacagagaagcctccggtggac
atccccgcccatgagggggcgctgtgctgcatcgccctcaacctgcagggaaccaggata
gccaccgcctccgagaaagggaccctgatcagaatatttgacaccatggcaggtcacctg
attcaggagttgaggcgggggtcacaggccgctaacatctactgcatcaacttcaaccag
gacgcgtccctcatctgtctgtctagtgaccatggtacagtccacatattcgctgcagag
gaccccaagaggaacaaacagtccagcttagcctcggccagtttccttcctaagtacttc
agctccaagtggagcttctccaagttccaggttccatcaaattcgccgtgtgtgtgtgcc
tttggaacagaacccaactctgtcatagccatttgtgctgatggcagctactacaagttc
ctgttcaacccgaagggggagtgttcccgagacgtctacgcccagttcctggagatgact
gatgagaagatctga
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