Salvelinus sp. IW2-2015 (Arctic char): 111978811
Help
Entry
111978811 CDS
T05762
Symbol
rhbdl1
Name
(RefSeq) rhomboid-related protein 1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111978811 (rhbdl1)
Enzymes [BR:
salp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
111978811 (rhbdl1)
Peptidases and inhibitors [BR:
salp01002
]
Serine peptidases
Family S54: Rhomboid family
111978811 (rhbdl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_1
DUF5580
DUF5580_M
EF-hand_11
Motif
Other DBs
NCBI-GeneID:
111978811
NCBI-ProteinID:
XP_023864831
LinkDB
All DBs
Position
LG18:complement(13211611..13269513)
Genome browser
AA seq
372 aa
AA seq
DB search
MDRSSLFQLIQEQLDPDNTGFIAVENFTSLVEHHELQLDPSKLDMLFALVQSNEDGQVCY
QELIELMSSKRSSSFRRAIANGRRTLQREILLDETGLGVYKRFVRYVAYEILPCETDRRW
YFHQNSLCPPPVFMAIITIIQIIVFMCYGIMLNKWVLQTYQPDFMKSSLVYHPRHRLQVW
RFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVVAGSLTVSITDMRA
PVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMILALVCMSSEVGRAVWLRFSPPLP
SSGPQPSFMAHLAGAVVGISMGLLILRSYEESLQKQCSWWVILFSFITFLLFAIFWNIFA
YELLGVQLPPAP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagctctctgtttcagctcatacaagagcagctggacccagacaacaccggt
ttcatcgcagtggagaacttcaccagtctggtggagcaccatgagctgcagctggacccc
tccaaactggacatgctgtttgccctggtgcagagcaacgaggatggacaggtgtgctac
caggagctcatcgagctgatgagcagcaagcgctccagcagtttccgacgggccatcgcc
aatggccgccgcacactgcagcgggagatcctattggatgagacgggcctgggcgtgtac
aagcgctttgtgcgctacgtggcctatgagattctgccctgcgagacagaccggcgctgg
tacttccaccagaacagcttgtgtccccctcctgtcttcatggccatcattaccatcatc
cagatcattgtgttcatgtgctatggcatcatgctgaataagtgggtactacagacgtac
cagccagacttcatgaagagctccctggtgtatcaccccagacaccgcctccaggtgtgg
cgcttcttcagctacatgttcatgcacgttgggttggaacagctggggttcaacgctctc
ctccagctgatgatcggcgttcccttggagatggtccatggcatcctacgcatcagtctg
ctctacatggctggtgtagtggcaggttccctgacggtgtccatcacagacatgcgtgct
ccagtggtggggggctccgggggtgtctacgctctgtgctcggcgcatctggccaacgtc
gtcatgaactgggccggtatgcggtgtccatacaagctcctccgcatgattctggcactg
gtgtgcatgagttcggaggtgggccgtgccgtgtggctgcgcttctccccgcccctgccc
tcctcggggccccagcccagcttcatggcacacctggcgggggcggtggtgggcatcagc
atgggcctgctcatcctgcgcagctacgaggagagcctgcagaagcagtgctcctggtgg
gtcatcctcttctccttcatcaccttccttctcttcgccatcttctggaacatcttcgcc
tacgagctgctgggggtgcagcttccacccgctccctga
DBGET
integrated database retrieval system
