Salvelinus sp. IW2-2015 (Arctic char): 111978822
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Entry
111978822 CDS
T05762
Symbol
trim45
Name
(RefSeq) tripartite motif-containing protein 45 isoform X1
KO
K12021
tripartite motif-containing protein 45
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111978822 (trim45)
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111978822 (trim45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
zf-B_box
ANCHR-like_BBOX
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_5
Snapin_Pallidin
Invasin_D3
Apolipoprotein
Ig_GEX2_N
Motif
Other DBs
NCBI-GeneID:
111978822
NCBI-ProteinID:
XP_023864846
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Position
LG2:complement(34124883..34129801)
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AA seq
601 aa
AA seq
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MSHCDQILGKDVDSXPTATTNSSSKNGDNRDVVINARAVCRVCKCLYREPKIMQCLHTFC
ADCVRQLEPFSVSSGVHNGKAVPLEGEPPSSAVTVLCPECDSEVDIPLSGVDGLTTDHLA
LDEVFLETLMSKNSVVCDLCNDGDAEKRCEVCSVNLCEFCIQAHRRQKRTSSHTVQCLED
LKTQGCLSRPVLCSLHPGQELRLFCEPCDLPVCLECAATFHRDHRCLPTRDVIDRHGGRI
RDLVTGRLRPRLDQLEESLRKVDLSQEALQTRVDAAVDEVRSFARGYASAVESHCLLLLR
RLEELGLQRRSHLHLQRAQLQQALSDTRGGVEFAERLLTCGSDAEILSAKDVTLRRLAVL
METGYNPPPETVCPDDGSSICFLPRESAGEVAGYPMVGVIHTKTLELSRCTIEGEGLQRG
REGQRGEFTLVCRDSAGEQMGRGGEAVLVSMVHKEKKDCRVEAAVVDNSDGSYTVSYTPM
EPGAYSVWVCVKALHVKGSPFVLNVRRQVRWHRGTFHCCSFCSSGGSKEARCGCMGTMPG
GFQGCGHGHKGHPGKPHWSCCGSTVEASECLPQSVITAVGGTITAVGGTGSPRGHLRTVE
L
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtcacattgtgaccaaattttgggaaaagatgtggattcckcgccaaccgcgaccaca
aactcgagctctaaaaacggagataaccgggacgtcgtgatcaatgcgagggcagtgtgc
cgcgtttgtaaatgtttatatcgcgagcctaaaattatgcagtgtttacacaccttctgc
gcagactgtgttcgtcaactggaaccattttcggtgtcttcgggagtacacaatggtaaa
gcggtccctctggaaggcgagccgccctcctctgccgtcacggttctctgtccggagtgt
gactccgaggtggacatcccgttgtccggagtggacgggctgaccactgaccacttggcc
ctggacgaagtgtttctggagacgctgatgagcaagaactctgtggtatgcgacctgtgc
aacgacggggacgcagagaagcgttgtgaggtgtgcagtgtcaacctctgtgagttttgt
attcaagcacacaggagacagaagaggacgtcgtctcacaccgtccagtgtctggaggac
ctgaagacccagggttgtctctctcggcccgtcctgtgctccctccaccctggccaggag
ctgcgtctcttctgtgagccctgtgacctacctgtctgcctggagtgtgccgccaccttc
caccgcgaccaccgctgcctccccacacgtgatgtcatcgatcgccatgggggccgtatc
cgggatttggttaccgggcgcctgcggccacggctggaccagctggaggagtcactgcgg
aaggtggacctatcccaggaggccttgcagaccagggtggatgcggcggtggacgaggtg
cgttccttcgcacgaggctatgctagcgctgtggagtcgcactgcctgttgctgctacgg
cgcttagaggagctgggtctgcagcgcaggagtcatctccatctgcagagggcgcagctg
cagcaggccctgtcggacacccgcgggggggtggagtttgccgagcggctgctgacgtgc
gggtcggacgcagaaatcctcagtgctaaggacgtgactctccgcaggctggctgtcctg
atggagacaggctacaacccccccccagaaaccgtctgccccgatgacgggagcagtatt
tgcttcctgccacgggagagtgcaggcgaggtggcggggtacccgatggtgggggtgatc
cacaccaagaccctggagctcagcaggtgcaccattgaaggggaaggtctgcagcgtggc
agggaaggccagagaggggagttcaccctggtgtgtagagactctgctggggagcagatg
ggtcgtggaggggaagctgtcctggtcagtatggtccacaaggagaagaaagactgcaga
gtggaggcggcggtggtggataacagtgatggctcctatactgtctcctacacccccatg
gagccaggggcctactctgtgtgggtgtgtgtcaaggccctacatgttaagggttccccc
tttgtcctgaatgtgaggagacaggtccggtggcaccgtggaacgttccactgctgttcc
ttctgctccagtgggggttctaaagaggcccgttgtggctgcatgggaaccatgccagga
gggttccagggctgtggtcacggccataagggtcaccccggtaagccccactggtcgtgc
tgtggaagtacggtggaggcctcagagtgcctgccacagagtgtcataacggcagtgggg
ggaacaataacagcagtgggggggacaggctcgccccggggccacctcaggacagtggag
ctctga
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