Salvelinus sp. IW2-2015 (Arctic char): 111978901
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Entry
111978901 CDS
T05762
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2 isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111978901
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
111978901
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Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Med4
DALR_1
NPHP3_N
TMEM70
Motif
Other DBs
NCBI-GeneID:
111978901
NCBI-ProteinID:
XP_023864916
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Position
LG19:31500129..31553602
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AA seq
551 aa
AA seq
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MNTCKYNGGVVRPLGSLASSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGEDPSKASNE
SLVRDGNGAPVKKNKDIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVY
GKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLE
LLVCAIHPIPGHYRFTWTARIAFTYTPSTANADVDIILSIPMFLRLYLIGRVMLLHSKLF
TDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDTQE
VTSNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELT
KAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIH
QAQKLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGMLEEKLDSV
TGSLQALPCLISQAINQQQQEFLDGFLHRFRPTSLGSERSERSERSERSWTSTARRRRSP
STAPHTSSDSG
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctgcaagtacaatggcggcgtagtgagaccactgggcagcctggcgtcgtcg
cggcgcaacctagcagagctcgactctgagacgcagcccctccagacgttgcacagctcc
ggcctggaggtggtggtatccaagggcaacggcgaggaccccagcaaggcgtccaacgag
agcctggtcagggacggaaacggtgctcctgtgaagaagaacaaggacattggctatagg
ctcggccaccggagggcgctctttgagaagcggaagagactcagtgactacgccctcatc
tttggaatgttcgggatcgtcgtcatggtgactgagactgaactgtcctggggagtttac
ggcaaggaatcttcgtactcatttgcactgaaatgccttatcagcctttccactgttata
ttgcttggtcttataataatgtaccatgcccgggaaatccagctgtttatggtggacaat
ggggcggacgactggaggatagccatgacgtacgagcgcatcttcttcatcgttctggag
ctgctggtgtgcgccatccaccccatcccgggccattaccgcttcacttggacggcgcgg
atcgccttcacctacactccgtcgacggccaacgccgacgtggacatcatcctctccatc
cccatgttcctcaggctctacctgatcggccgcgtcatgctgctgcayagcaagctcttc
acagacgcctcgtcacgcagcattggcgccctcaacaagatcaacttcaacacacgcttc
gtcatgaagacgctcatgaccatctgccccggcaccgtgctgctggtcttcagcatctcc
tcctggatcatcgccgcctggacggtgcgagtctgcgagaggtatcatgacacacaggaa
gtgaccagtaacttcctgggagccatgtggctgatctctattaccttcctctcgattggc
tacggagacatggtacctaacacgtactgtggtaaaggcgtatgtctgcttacagggatc
atgggagctggctgcactgcgctggtggtcgccgtggtmgccaggaagttggagttgacc
aaggctgagaagcatgtccacaacttcatgatggacacacaactctgcaaacgagtaaag
aacacagctgccaatgtactcagggaaacatggctcatctacaaacacactaagttggtc
aagaagatcgatcatgccaaggtgcggaaacaccagcgcaagtttctacaggctatccat
caagctcagaaactgcgcagtgtgaagatggagcagaggaaactcaatgatcaggccaac
acgctagtggacctggctaagacccagaatgtgatgtatgacctggtgtcggagctgcag
gagcgtagcgaggaactggacaagcggatcggcatgctggaggaaaagctggactcggtg
acgggcagcctacaggctctgccctgcctcatctcccaagccataaaccagcagcagcag
gaattcctggacggcttcctgcaccgcttccggcccacctcactgggctcagagcgctcg
gaacgttccgaacgttccgagcgttcctggacctccacagcccgccggcgtcgctcgccc
tcaacggcaccgcacacctcctctgacagcggctag
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