Salvelinus sp. IW2-2015 (Arctic char): 111978912
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Entry
111978912 CDS
T05762
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111978912
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
111978912
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
Motif
Other DBs
NCBI-GeneID:
111978912
NCBI-ProteinID:
XP_023864930
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Position
LG2:complement(34514052..34541965)
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AA seq
874 aa
AA seq
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MGLKDHLEDETGHILNLGLDLDYLHVEGTDRQASLSATVGTHSGALEGDETEVGGTHSSV
SSSSISSSSSCSNSSEESAASDSEDERGVQHGSGSDAHTTHPHPCHPARQGLAQSPHSRD
PKHSTNPFTEYRSKMEFALKLGYSEELVLLVVRKLGPDALINDILGELVKLGTKSETDQA
GGSATSHSPSSSLSSSSLDSCRLDCSSQLLLDDKENIRPVVVDGSNVAMSHGNKEVFSCH
GIQLAVDWFLERGHRDITVFVPAWRKEQSRPDTLITDQEILRDLEKDKILVFTPSRRVQG
RRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYTFVNDKFMPPD
DPLGRHGPSLENFLRKRPVIPEHRKQQCPYGKKCTYGHKCKFFHPERGSQPQRAVADELR
AKNSSSSSTSSSKRVGEALMVKSHSMSSSSRVDGIPDPHQAPPKRQSDPSLCAPSYNDLL
EERLGRRTKAEARRGSSSSSSSSCSSSLLASAPGGPPSSHGFSLQDWGNTSSRAPGLSGL
GHSKSYSTCESPELSYHSLMRAYSSLSLVVPRSPDRLFPADLRTGSLVSDCSSEGSVSSD
SFSPDPLLDDSLKCHYPHPHHHHHHCXSCYPHHPNHPPPGLTQHPHGGSHHGYPQAQSSL
EDPPSSLHHFKAQLSYLPPHIQQPSVGSHSGCSGNYPPQTLSQTSSPHSLSHNSPLGHNL
GGSTWQDNNSLYKQSHVHPRRIYPGPGQEQRLARWDPHYQHPPQACYEPFTFQSLPEGRK
QPWHSPWPRGTHSPHPQSLSSSHPPPLTHPSTAPQHQEPPALGRYQDVRENVFVNLCNIF
PPELVRVVMVRNPHVMDAQQLAAAILAEKSQAGY
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatgaaacaggccacatcctcaacctggggctggat
ttggactacctccacgtggaaggcaccgaccgccaggccagcttgagtgccacagtcggc
acacactcaggagccttggagggggacgagacagaggtaggaggcacccatagcagtgtc
agtagtagcagcatcagcagtagtagtagttgtagtaactcctctgaagagagtgctgcg
tcggacagcgaggatgagcggggggtccaacatggctctggttctgacgctcataccacc
cacccgcacccctgtcaccctgctaggcagggcctggcacagagcccccattctagggac
ccaaaacactccaccaaccccttcacagagtaccgctccaagatggagtttgccctgaag
ctgggctactctgaggagctggttctgctggttgtgcggaagctagggcctgacgccctc
attaatgacatactkggagaactggtcaaactgggcaccaagtcagagacggatcaggct
ggggggtcggccacctcccactcgccctcctcctccttatcctcctcctctctggactcc
tgcaggctggactgctcctcccagctgctgttggatgacaaggagaacatcaggcctgtg
gtggtggatgggagtaatgtagcaatgagccatgggaataaggaagtgttctcctgtcac
ggcatccagctggctgttgattggttcctggagcgtggtcaccgtgacatcactgtgttt
gttcccgcctggagaaaggaacagtccagaccggacaccctcatcacagaccaggagata
ttgcgggatctagagaaagacaagatccttgtgttcactccctctcgtcgggtccagggc
cgccgggtggtctgctatgacgaccgcttcatcgtcaagctggcctacgagtccgacggc
atcatcgtctctaacgacaactaccgggacctggccaatgagaagccagagtggaagaag
ttcattgacgagcggttgctcatgtatacgttcgtcaatgacaagttcatgcctcctgat
gatcctctgggtcgccatggtcccagtctggagaacttcctgaggaagagaccagttatc
ccagaacacaggaagcagcaatgtccctatgggaagaagtgcacttacggccacaagtgt
aagttcttccaccctgagagaggcagtcagccccaacgcgctgtggccgacgagctgcgt
gccaagaactcctcttcatcctctacctcttcctccaaaagggtgggcgaggctctgatg
gtaaagagtcacagcatgtccagcagctccagggtagacgggatcccagacccccaccaa
gctcccccaaagaggcagtcggaccccagcctttgcgccccctcatacaacgacctcctg
gaagagcgtctgggcaggaggactaaagcagaggcccgcagagggagtagcagcagcagt
agcagcagctgcagcagcagcctcttggcttctgctcctgggggacctccttccagccac
ggcttctctcttcaggactgggggaacacctcctccagagctccagggctgtcggggctt
ggtcactcaaagtcatactccacgtgtgaatccccggagctaagctaccactccctgatg
agggcctactccagcctaagcctggtagtgccgcggagccccgatcggctgttcccggct
gacctacggacgggctcactggtgtctgactgcagcagcgagggcagcgtgagctcagac
tccttctcccctgatcccctgctggatgacagcctcaagtgccactatccccacccccat
caccaccaccatcactgccytagctgctacccacatcaccccaaccacccaccccctggt
ctgacccagcacccccatggaggctcccaccatggctaccctcaagctcaaagcagcctg
gaggatcctccctcctccctccaccacttcaaggcacagctctcctaccttcctccccat
attcagcaaccgtctgtggggagccactctggctgttctgggaactaccctccccaaact
ctatcccagacctcaagcccccactccctctctcacaactctcctctggggcataacctg
gggggctccacctggcaggacaacaacagcctctacaagcaatcccatgtccacccaagg
aggatctaccctgggccaggacaggagcagcgactggccagatgggacccccactaccag
catcccccccaggcctgctacgagcctttcactttccagtccctgcctgagggccgcaaa
caaccctggcactcgccctggcccagggggacacactctccccatcctcaatccctttcc
tcctcccatcctccacctcttacccacccctccacggccccccagcaccaggagccccct
gccctgggcagataccaggatgtgagggagaatgtgtttgtcaacctgtgtaacatcttc
cccccagagctggtgagggtggtgatggtgaggaacccccatgtgatggacgcccagcag
ctggctgcagcmatcctggctgagaagtcccaggctggctactga
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