KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111978912
Entry
111978912         CDS       T05762                                 
Name
(RefSeq) probable ribonuclease ZC3H12C
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:salp03019]
    111978912
Messenger RNA biogenesis [BR:salp03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     111978912
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6
Other DBs
NCBI-GeneID: 111978912
NCBI-ProteinID: XP_023864930
LinkDB
Position
LG2:complement(34514052..34541965)
AA seq 874 aa
MGLKDHLEDETGHILNLGLDLDYLHVEGTDRQASLSATVGTHSGALEGDETEVGGTHSSV
SSSSISSSSSCSNSSEESAASDSEDERGVQHGSGSDAHTTHPHPCHPARQGLAQSPHSRD
PKHSTNPFTEYRSKMEFALKLGYSEELVLLVVRKLGPDALINDILGELVKLGTKSETDQA
GGSATSHSPSSSLSSSSLDSCRLDCSSQLLLDDKENIRPVVVDGSNVAMSHGNKEVFSCH
GIQLAVDWFLERGHRDITVFVPAWRKEQSRPDTLITDQEILRDLEKDKILVFTPSRRVQG
RRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYTFVNDKFMPPD
DPLGRHGPSLENFLRKRPVIPEHRKQQCPYGKKCTYGHKCKFFHPERGSQPQRAVADELR
AKNSSSSSTSSSKRVGEALMVKSHSMSSSSRVDGIPDPHQAPPKRQSDPSLCAPSYNDLL
EERLGRRTKAEARRGSSSSSSSSCSSSLLASAPGGPPSSHGFSLQDWGNTSSRAPGLSGL
GHSKSYSTCESPELSYHSLMRAYSSLSLVVPRSPDRLFPADLRTGSLVSDCSSEGSVSSD
SFSPDPLLDDSLKCHYPHPHHHHHHCXSCYPHHPNHPPPGLTQHPHGGSHHGYPQAQSSL
EDPPSSLHHFKAQLSYLPPHIQQPSVGSHSGCSGNYPPQTLSQTSSPHSLSHNSPLGHNL
GGSTWQDNNSLYKQSHVHPRRIYPGPGQEQRLARWDPHYQHPPQACYEPFTFQSLPEGRK
QPWHSPWPRGTHSPHPQSLSSSHPPPLTHPSTAPQHQEPPALGRYQDVRENVFVNLCNIF
PPELVRVVMVRNPHVMDAQQLAAAILAEKSQAGY
NT seq 2625 nt   +upstreamnt  +downstreamnt
atgggcctgaaggaccatctggaggatgaaacaggccacatcctcaacctggggctggat
ttggactacctccacgtggaaggcaccgaccgccaggccagcttgagtgccacagtcggc
acacactcaggagccttggagggggacgagacagaggtaggaggcacccatagcagtgtc
agtagtagcagcatcagcagtagtagtagttgtagtaactcctctgaagagagtgctgcg
tcggacagcgaggatgagcggggggtccaacatggctctggttctgacgctcataccacc
cacccgcacccctgtcaccctgctaggcagggcctggcacagagcccccattctagggac
ccaaaacactccaccaaccccttcacagagtaccgctccaagatggagtttgccctgaag
ctgggctactctgaggagctggttctgctggttgtgcggaagctagggcctgacgccctc
attaatgacatactkggagaactggtcaaactgggcaccaagtcagagacggatcaggct
ggggggtcggccacctcccactcgccctcctcctccttatcctcctcctctctggactcc
tgcaggctggactgctcctcccagctgctgttggatgacaaggagaacatcaggcctgtg
gtggtggatgggagtaatgtagcaatgagccatgggaataaggaagtgttctcctgtcac
ggcatccagctggctgttgattggttcctggagcgtggtcaccgtgacatcactgtgttt
gttcccgcctggagaaaggaacagtccagaccggacaccctcatcacagaccaggagata
ttgcgggatctagagaaagacaagatccttgtgttcactccctctcgtcgggtccagggc
cgccgggtggtctgctatgacgaccgcttcatcgtcaagctggcctacgagtccgacggc
atcatcgtctctaacgacaactaccgggacctggccaatgagaagccagagtggaagaag
ttcattgacgagcggttgctcatgtatacgttcgtcaatgacaagttcatgcctcctgat
gatcctctgggtcgccatggtcccagtctggagaacttcctgaggaagagaccagttatc
ccagaacacaggaagcagcaatgtccctatgggaagaagtgcacttacggccacaagtgt
aagttcttccaccctgagagaggcagtcagccccaacgcgctgtggccgacgagctgcgt
gccaagaactcctcttcatcctctacctcttcctccaaaagggtgggcgaggctctgatg
gtaaagagtcacagcatgtccagcagctccagggtagacgggatcccagacccccaccaa
gctcccccaaagaggcagtcggaccccagcctttgcgccccctcatacaacgacctcctg
gaagagcgtctgggcaggaggactaaagcagaggcccgcagagggagtagcagcagcagt
agcagcagctgcagcagcagcctcttggcttctgctcctgggggacctccttccagccac
ggcttctctcttcaggactgggggaacacctcctccagagctccagggctgtcggggctt
ggtcactcaaagtcatactccacgtgtgaatccccggagctaagctaccactccctgatg
agggcctactccagcctaagcctggtagtgccgcggagccccgatcggctgttcccggct
gacctacggacgggctcactggtgtctgactgcagcagcgagggcagcgtgagctcagac
tccttctcccctgatcccctgctggatgacagcctcaagtgccactatccccacccccat
caccaccaccatcactgccytagctgctacccacatcaccccaaccacccaccccctggt
ctgacccagcacccccatggaggctcccaccatggctaccctcaagctcaaagcagcctg
gaggatcctccctcctccctccaccacttcaaggcacagctctcctaccttcctccccat
attcagcaaccgtctgtggggagccactctggctgttctgggaactaccctccccaaact
ctatcccagacctcaagcccccactccctctctcacaactctcctctggggcataacctg
gggggctccacctggcaggacaacaacagcctctacaagcaatcccatgtccacccaagg
aggatctaccctgggccaggacaggagcagcgactggccagatgggacccccactaccag
catcccccccaggcctgctacgagcctttcactttccagtccctgcctgagggccgcaaa
caaccctggcactcgccctggcccagggggacacactctccccatcctcaatccctttcc
tcctcccatcctccacctcttacccacccctccacggccccccagcaccaggagccccct
gccctgggcagataccaggatgtgagggagaatgtgtttgtcaacctgtgtaacatcttc
cccccagagctggtgagggtggtgatggtgaggaacccccatgtgatggacgcccagcag
ctggctgcagcmatcctggctgagaagtcccaggctggctactga

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