Salvelinus sp. IW2-2015 (Arctic char): 111978938
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Entry
111978938 CDS
T05762
Name
(RefSeq) retinal homeobox protein Rx1-like
KO
K09332
retina and anterior neural fold homeobox protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111978938
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
111978938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
111978938
NCBI-ProteinID:
XP_023864955
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All DBs
Position
LG19:complement(389021..392245)
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AA seq
342 aa
AA seq
DB search
MHLSMDTLGMVDDGCMSPDNYHDMVKGGGSSVGGRVHSIDVILGFRKDQEPLLTPVEGVG
AHKVDTEGLEYQGKQIQSDPYGHLASLGDITQHSAFHDQCDESGLFCSDKCDGDLGDLQK
RMDSDGGKSPEPPEEDHPKKKHRRNRTTFTTYQLHELEIAFEKSHYPDVYSREELAIKVN
LPEVRVQVWFQNRRAKWRHQEKMDSSSMKLHDSPMLSFNRPPMPSNDGPMSNPWLTSPMT
SATPMNTIPGYMGPGQSPYLQSAYPSHSHSQRFLNSPPVHGKVHQGMVQGMQVMAPSPCQ
CPPTFNDKYPMHEHVERSSDIAVLRMKAKEHIQSMDKTWQHM
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgtcaatggataccttgggaatggtggatgacggctgcatgtcaccagacaac
taccatgacatggtgaagggaggggggtctagcgtaggaggtcgagtccacagcattgat
gtgatcctgggcttcaggaaagaccaggaacccctgctcacccccgtggagggcgtgggg
gcccataaagtggacacagagggtctggagtaccaggggaagcagatccagtcagacccc
tacggacaccttgccagcctgggggacatcacacagcactctgccttccatgatcagtgc
gatgagtcaggccttttctgcagtgataagtgtgatggggacctgggcgatctccagaag
aggatggacagcgatggggggaagtccccggaacccccagaggaggaccaccccaagaag
aagcaccggcgtaaccgcaccaccttcacaacctaccagctccacgagctggagatagcc
tttgagaagtcccactaccctgatgtctacagccgggaggagctggccattaaggtcaac
ctccctgaggtccgcgtccaggtttggttccagaatcgtcgggctaagtggcgacaccag
gagaagatggactctagctccatgaagctccatgactcccccatgctgtccttcaaccgg
ccgcccatgccctccaacgacgggcccatgtctaacccctggctgacctctcccatgact
agtgccacccccatgaacactatccccggctacatgggcccagggcagagcccttacctc
cagtctgcttaccctagccactcccacagccaacgcttcctcaacagccctccagtacat
ggcaaggtgcaccaggggatggtgcagggcatgcaggtaatggccccgtctccctgtcag
tgtcctcccaccttcaacgataagtacccaatgcatgagcatgtggaacgtagctccgac
atcgcagtgctgaggatgaaggctaaggagcacattcagtctatggataaaacctggcag
cacatgtga
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