Salvelinus sp. IW2-2015 (Arctic char): 111978963
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Entry
111978963 CDS
T05762
Name
(RefSeq) claudin-18
KO
K06087
claudin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03272
Virion - Hepatitis viruses
salp04382
Cornified envelope formation
salp04514
Cell adhesion molecules
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
111978963
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111978963
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111978963
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111978963
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111978963
04147 Exosome [BR:
salp04147
]
111978963
04515 Cell adhesion molecules [BR:
salp04515
]
111978963
Cilium and associated proteins [BR:
salp03037
]
Other cilia and associated proteins
Stereociliary proteins
111978963
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
111978963
Exosomal proteins of colorectal cancer cells
111978963
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
L1 family
111978963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Amastin
ThiF
CyanoTRADDas_TM
Motif
Other DBs
NCBI-GeneID:
111978963
NCBI-ProteinID:
XP_023864983
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All DBs
Position
LG19:complement(32617896..32620709)
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AA seq
243 aa
AA seq
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MATALQTGGFVLGLLGAAAIIAATGMNNWSVKDRQGDVVTSVYTYKGLWQNCEVGTSGFT
ECRPLYGLLGFSGTFQAVRALMIVGIVLGVIGAMIALFSLKCLKMGSMEDSSKAKMTLTA
GVMFIIAGICAIAGASIYANQIVASFMMTTYNPNYGGGMGQGMEMGGGNMMPRYTFGPAL
FVAWIGAALLLLGGILKCVAFRGLQPDKSTYTGVAYKAPQAQNRPVYDDHHAEDGKRDNQ
KYV
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcactccagacgggtggattcgtcctgggcctgctcggcgcggctgccatc
atcgccgccacggggatgaacaactggagcgtcaaggaccgtcagggagacgtggtgacc
tcggtgtacacctataagggcctgtggcagaactgtgaggtgggcacctcaggcttcact
gagtgccggcccctctacggcctcctgggcttctcaggtacctttcaggcagtgagagca
ctgatgattgtgggcattgttctgggtgtaataggggccatgatagccctgttctccctc
aagtgccttaaaatgggcagcatggaagattcctccaaagccaagatgacccttacagcg
ggggtcatgttcatcattgcaggcatttgtgctattgctggagcttcaatctatgctaac
caaattgtggctagtttcatgatgaccacctacaaccccaattatggaggagggatggga
cagggcatggagatgggaggaggaaatatgatgccgaggtacacgtttggccccgccctc
tttgttgcctggataggcgcagctttgctcttattgggcgggattctgaagtgtgttgcc
ttcaggggactacaaccggacaagtcaacctacacaggagttgcttacaaagccccccaa
gcccagaacaggcccgtctatgatgaccaccatgcagaggatgggaagagagacaaccaa
aaatatgtataa
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