Salvelinus sp. IW2-2015 (Arctic char): 111978964
Help
Entry
111978964 CDS
T05762
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111978964
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111978964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111978964
NCBI-ProteinID:
XP_023864984
LinkDB
All DBs
Position
LG19:complement(32620810..32623529)
Genome browser
AA seq
244 aa
AA seq
DB search
MLMRISPCAIEMAKPLDHIKRPMNAFMVWSRGQRRKMSLENPKMHNSEISKRLGAEWKLL
SESEKRPYIDEAKRLRAQHMKDHPNYKYRPRRKPKSLLKKDRFLFPFPFLGDAEHLKGFS
TESILASAEKARALLPPTSSPYSLLDPGQFSTGAVQRISEIPHALGANGLSYAPSFGYQT
GAFGSLGCPSQHTHTHPSSTNPGYALPCNCGTWSATGLQPQVAYILFPGMAGIDPYSCSP
HSSV
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgcgcatttcaccgtgcgctattgagatggcaaaacctttggatcacataaag
aggcccatgaacgctttcatggtgtggtctcgcggtcagagacgaaagatgtcactggag
aatcccaaaatgcacaactctgaaatcagcaaaagacttggcgcggaatggaagttgctt
tccgaatcagagaagcgaccatacattgatgaagccaagagattgcgcgcgcaacacatg
aaagatcaccccaactacaagtacagacctcggcgcaaacccaagagcttgctaaagaag
gaccggttccttttcccctttcccttcctcggggacgcagaacatttgaaaggattttcc
accgagtccattttggcatccgctgagaaagctagagcccttttgccgccgacgtcgtca
ccatattcgctccttgacccaggtcaattcagcaccggtgctgtccagaggatctcagaa
attccccacgccctgggtgccaacggcttgtcctatgcgccctcttttggataccagact
ggcgcgtttggaagtttgggatgccccagccagcacactcatactcacccgtcctccacg
aacccggggtacgccttgccctgtaactgtggcacttggtcggcgacgggtttacagccy
caggttgcatacatcctttttccaggtatggcaggcatagacccgtactcctgttcacca
cattcaagtgtgtga
DBGET
integrated database retrieval system
