Salvelinus sp. IW2-2015 (Arctic char): 111979047
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Entry
111979047 CDS
T05762
Name
(RefSeq) double-stranded RNA-specific editase B2-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111979047
Spliceosome [BR:
salp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111979047
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
DSRM_2
Motif
Other DBs
NCBI-GeneID:
111979047
NCBI-ProteinID:
XP_023865106
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All DBs
Position
LG19:complement(24594939..24632159)
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AA seq
746 aa
AA seq
DB search
MVPAHHPSALYTDISRGLSRTTALQRKQPLVEGKDRLLYELQLIWKTMMTSWSVTKKNAL
VHLNELRPGLQYEIVSQTGPVHAPLFAVGVEVNGLRFEGRGPTKKKAKMRAAELALRSFI
QFPNAHQAHITMGNLNFINTTAPTDFTSDQADLVPDTLFKEFQPEAQEDQIFNHRTGGKE
LQFEEPPAQGQLYRTVKKGQELLSSICNHGRLVRLTLDLMSSDNQKRQRIGSAIVGELRP
VALLNELMPGLRYVCLTERKKGRPIRSFVMAVRVDGRVFEGCGRSKRLAKAEAAASALQD
LFNISLGPERSISNTASWAKSAQLPQCFAEYIFHLVREKHSELADCCCTTSQSHRRHKVL
AGIVMTRGFDLRRAQVVSLGTGTKCISGECVSDQGWAVNDCHAEVTTRRAFLRFLYAQLE
LFLCNWPGSLEQSIFVRDKESVYRLRDGILFHMYVSSSPCGDARLNCPYEITATHQSGYR
FVRKLRCHLRMKMEGGEGTLPVSVLRANQKWHRGLPREPPVTMSCTDKIARWNILGLQGS
LLSHLVEPVYLHSLTVGSLCHTGHLGRTMARRMGHIAPLPSSYRRNKLLLGCLSSSEGRQ
PGKSPSFSVNWSAGDGELEVVDVSTGRKDSGTPSRLCKRSFFTRWERLHHQLSSPGGVLD
VEESLFLMSDSTTTLSARSVEGRVSPRSDDTCRKTMEEAMKTYCGAKMAAGAYQRARHKF
VVSLQEAGLGIWNRKPPEQEHFQSRV
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggtacctgcacatcatccatcagctctttacactgacatctccagagggctctccagg
actactgctctacagaggaagcagccattggtggaaggaaaagacaggcttctctacgaa
ctccaattgatctggaagacaatgatgacttcctggtctgtcacaaagaagaatgccctg
gtgcatttgaatgagctgagaccaggtctacagtatgagatagtgtctcagacagggcca
gttcacgcccctttgttcgctgtaggagtagaggtcaacggtctcaggttcgagggccga
ggccccaccaagaagaaggctaagatgagggcagcagagcttgctcttaggtccttcatc
cagttccccaacgcccatcaggctcacatcaccatgggaaacctcaacttcatcaacacc
acagcaccaacagacttcacctcagatcaggccgatctcgtccccgacacgctcttcaag
gagtttcagccagaagcacaggaagaccaaatctttaatcacagaacagggggaaaggag
ttgcagttcgaggaaccaccagcacaaggacaactctacagaacagtgaaaaagggacag
gagttgctctccagtatctgtaaccatgggagactagtgcgcctgacccttgacctgatg
tcctcagacaatcagaagaggcagaggatcggttccgctatcgtcggggaactgaggccc
gtggctctgctcaatgagttaatgccaggcttgaggtacgtctgcctgacagagagaaag
aaaggcaggccgatcaggagctttgtgatggcagtacgggtggatggaagggtatttgag
ggctgtgggcgcagtaagaggctggctaaagccgaggcagcagcctcagccctacaggac
ctgtttaacatcagtctgggtcctgagaggagcatcagcaatactgccagctgggccaag
agcgcacagctacctcagtgctttgcagagtatatcttccacttggtgagagagaaacac
agtgagctggctgactgttgctgcactacctcccagtcgcacagacgtcacaaagtactg
gcaggcatcgtaatgaccagaggttttgatctgaggcgagcccaggtggtgtctttgggg
acagggaccaagtgtatcagtggagagtgtgtcagtgaccagggatgggcggttaatgac
tgccatgctgaggtcaccaccaggagggctttcctccgcttcctctatgcccaactggag
cttttcctctgcaactggccaggcagtttggagcagtcgatttttgtgcgagacaaagag
tcagtatacagactgagagacggtattctgttccatatgtatgtgagttcatcgccctgc
ggggacgcacgcctcaactgtccctacgagatcacagctacacaccagagcgggtataga
tttgtgaggaagttgcgctgccatctgaggatgaagatggaaggcggtgagggtacactt
cctgtcagcgtactgagagccaatcagaaatggcacagggggttgccgagggaacctccc
gtaaccatgtcctgcacagataaaattgccaggtggaatattctaggtctccagggctct
ctcctgtctcacctggtggagccggtgtacctccacagcctcacagtgggcagcctgtgc
cacacgggtcacctgggaaggaccatggcacgacgcatggggcacatcgcccctctgccc
tcgtcctatagacgcaacaagctactgctcggctgcctcagcagcagtgagggtcggcag
ccagggaagtctcccagcttcagtgtgaactggagtgctggagacggagagctggaggtg
gtggatgtctccactggcaggaaagactcagggacaccatccagactctgcaagagatcc
ttcttcactcgctgggagagactacaccaccagcttagcagtccaggaggagtattggat
gtagaggagtccctatttcttatgtcagatagcacaacgactctgtctgcacggtcggtt
gagggacgagtgtcgcctaggagtgacgacacctgtcggaagacaatggaggaggccatg
aagacgtactgtggagctaagatggcagcaggggcctaccagagagccaggcataagttt
gtcgtctcgctgcaggaggcaggtctgggcatctggaacaggaaaccaccagaacaggag
catttccagagcagggtgtga
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