Salvelinus sp. IW2-2015 (Arctic char): 111979142
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Entry
111979142 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111979142
04121 Ubiquitin system [BR:
salp04121
]
111979142
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111979142
Membrane trafficking [BR:
salp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
111979142
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111979142
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
DUF8608
FAR1_N
zf-RING_16
HypA
DZR
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
111979142
NCBI-ProteinID:
XP_023865239
LinkDB
All DBs
Position
LG19:6243768..6246780
Genome browser
AA seq
312 aa
AA seq
DB search
MAEAPLRPCRFFCHQCSAEINPRLPDYTCPQCESGFIEELSEERSTENESTSIASTSDQN
RPTFEIMDHQHMFTFPPGYGQFSLGIFDENFDLRAGMPTEDNRETENRREREMASRQRYS
ARQPRGRHIPRRQGQRHEGVPTLEGIIQQLVNGIIAPTAMAPNIGMGPWGMLHSNPMDYA
WGANGLDAIITQLLNQFENTGPPPADRERIKTLPTIQITEEHVGSSLECPVCKEDYSVGE
TVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPGLSGMNFSPSSSSSSSS
NSPSNENAANNS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctcccctacggccctgtcgttttttttgtcaccaatgttcagcagagatc
aaccctcgtctcccggactacacctgtccgcagtgtgaatctggcttcattgaagagcta
tcagaggaaagaagcactgaaaatgagtccacatccattgcctccaccagcgatcagaac
cgtccgactttcgagattatggaccaccagcacatgtttacatttccgcccggatacgga
cagttttctctggggatctttgacgagaatttcgacctccgagcggggatgccgacggaa
gacaaccgcgagacggagaaccggcgggaacgggagatggcatcacggcaacggtacagt
gcccggcaaccacggggacgacacatcccacggcgacagggacagagacacgagggagta
cccactttagagggaatcatccagcagctagtaaatggaatcatagcacccacagccatg
gcaccaaacattgggatgggaccatggggcatgctacactcaaatccaatggactatgct
tggggtgccaatggacttgatgctatcattacccagttattgaatcagtttgagaacact
ggtcctcctcctgctgacagagagaggataaagaccctgcccaccatccagatcacagag
gaacatgtgggttccagtttagaatgtcctgtgtgcaaagaagactacagtgtcggggag
actgtcaggcaacttccgtgcaatcacctgtttcacaatgactgtatagtaccatggctg
gaacagcacgacacatgtccagtgtgcagaaagagcctcagtggacagaacacagctacg
gaccccccgggactatcaggaatgaacttctccccttcttcctcctcctcatcctcctcc
aactcccccagtaacgagaacgctgccaacaactcctag
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