Salvelinus sp. IW2-2015 (Arctic char): 111979158
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Entry
111979158 CDS
T05762
Name
(RefSeq) target of EGR1 protein 1
KO
K13202
target of EGR1 protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111979158
Spliceosome [BR:
salp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111979158
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CAF1
zf-CCCH
zf_CCCH_4
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
111979158
NCBI-ProteinID:
XP_023865263
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Position
LG19:21238217..21242517
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AA seq
511 aa
AA seq
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MTSSMVVPVIDVQNDNFKELWPTMVLAIKAASFIALDTELSGLGNRKALLAECIEDRYKA
ICNAARTRSILSLGFACYKKLENKDDDDTYLVQVYNLTLLCSEEYVIEPQSVQFLVQYGF
DFNKQYAEGVPYLRGNDRGVDAHGMNMRMLFVELLRARKPLVLHNGLIDIVFLYQCFYAQ
LPDKLGTFTADLSQMFPAGIYDTKYATENELRFAASYLEYAYKKCKLDNSKSIEAGGGGR
HLFLEFCKYSGPLSNYVDYRPCLAGFSPDGLLNVCQRFSAYGWCPNGSQCPLSHDTDLII
QHNEKKKKRKRKRKNSSQGKVEGAPMSKQPHMELKQDQVIPDKDTKPPPLTELVDGAQVQ
GPESEEKLKTKVEEGNGVREPQAVSPDEEMKTDKEVERNGVSEPQPLATPDAEKKEESKR
KKLEGGTHRAGFDAFMTGYIFSYAATLTERVGKPPSSESWLPECLNKVYLSGKSVPMHIV
KSTFSKSFKAHLHKMDVVWGKGVVSKVEGTV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgacatcctccatggtggtccctgttattgatgtgcagaatgataatttcaaagaactg
tggccaactatggtccttgcaatcaaggcggcctccttcattgcactggatacggaattg
agtggccttggaaatagaaaagctttgctggcagaatgcatagaggaccgttacaaagcc
atatgcaatgcagctcgcacacgctccattctctcccttgggtttgcttgttataagaaa
cttgaaaacaaggatgatgatgatacgtaccttgtgcaggtgtacaacctgacattgctc
tgcagtgaggagtacgtaattgaaccacagtccgtgcagttcctggtgcaatatggattt
gacttcaacaaacaatatgctgaaggtgtcccttatctcaggggcaatgacaggggagtg
gatgcccatggaatgaacatgaggatgctgtttgtggaactcctacgggctcgcaagcct
ttggtgctgcacaatggcttgattgacatagtgttcctttatcagtgcttctatgcccaa
ctgccagataaactaggaactttcactgctgacttgtcccagatgttccctgctgggatc
tatgacaccaagtacgctacagagaatgagctgcgctttgctgcctcttacctggagtat
gcctacaagaagtgcaaactggacaacagcaagtcgattgaggctggtggtggtggacgc
catctgttcctggagttctgcaaatactcaggccccctgagcaactatgtggactatagg
ccctgtctggctgggtttagcccggatggacttctcaatgtttgccagcgcttctctgct
tatggttggtgccccaatgggtcacagtgtcccttgtcacatgacactgacctcatcatc
cagcacaatgaaaagaaaaagaaacggaagaggaaaagaaagaactcttctcaggggaaa
gttgaaggtgcccccatgagcaagcagccccatatggagctaaagcaggaccaggtaatc
cctgacaaagacaccaaacctccccctctcacagagctggtagatggggctcaggtacag
gggccagagagcgaggagaagttgaagactaaggtggaggaaggcaacggagtcagagag
ccacaggctgtgtctccagatgaggaaatgaagacagacaaagaggtggaaagaaatgga
gtatcagagccacagcctctggccacaccggatgcagagaagaaagaagagtccaagagg
aagaagctggagggaggtacccaccgggcagggtttgacgcattcatgacgggctacatt
ttctcctatgctgccactttgacagagagagtaggtaagccaccgagctcagagtcctgg
ctccctgagtgtctgaacaaggtttacctcagtggcaagtctgtcccgatgcatatcgtt
aagagcacattctccaagtccttcaaggctcacttgcacaagatggatgtcgtgtggggg
aagggtgtggttagcaaagtagagggaacagtataa
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