Salvelinus sp. IW2-2015 (Arctic char): 111979165
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Entry
111979165 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220 isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111979165
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111979165
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111979165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4
zf-RING_2
DUF4428
zf-RING_UBOX
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
111979165
NCBI-ProteinID:
XP_023865274
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Position
LG19:21568963..21622610
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AA seq
400 aa
AA seq
DB search
MEQEMERLTHMHLSKNPSHGHKDGSVVPGTPKSMLLSVHIKREGESPVVSPLSSEDAHHS
DRYQTFLRVRANRQTRLNVDDLCWCRRYAKESVKNAPLGLHNGAPLAPCCIGHARIGKMK
RRKPEDGQVCPLCSAPLAGTEEEMSRHVEQCLFKREGAFAEDDSADIDGENGTRFEEYEW
CGQKRVRATTLLEGGFRGTGFAMCSTKESHDSDADLDVDGDDTLEYGKAQYTEADIIPCS
GEDQGEAKEREALRGAVLNGGMPSNRIAAEFSKWASDEMPSTSNGESSKQQLPQDPNAAC
STSNAPRTCKNSEIEKITEGSKATTFEALKARIRELEKQILRGDRYKCLICMDSYTMPLT
SIQCWHVHCEECWLRTLGNKKLCPQCNTITSPGDLRRVYL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggagatggagcgcctcacccacatgcacctcagtaagaacccatcacacgga
cacaaggacggcagtgtggttccaggaactcctaagtctatgctgttgtcggtgcacatc
aaacgcgagggagagtcaccggtggtctcccctctctcttctgaagatgcccaccactcc
gacagataccagacatttttaagagtgcgagcaaacaggcaaacgcggttgaatgtcgat
gacctctgctggtgcaggcgctacgccaaggaaagtgtcaaaaatgctccccttggactg
cacaatggagccccccttgccccctgctgcattggccacgcccggattgggaagatgaaa
cgccggaagccagaggatgggcaggtatgtccactgtgcagcgcgccgctggcagggact
gaggaggagatgagtaggcatgtggaacaatgtctgttcaagagggagggtgcgtttgct
gaggatgactctgcagacattgacggagagaacgggacccgcttcgaggagtacgagtgg
tgcggccagaagagggtcagagctaccaccctgctggaaggaggcttcagaggaacaggc
tttgccatgtgtagcacgaaggagagccacgacagcgacgccgacctggacgtggatgga
gacgacacgctagagtacggcaaggcccagtacacagaggcagacatcattccctgctcc
ggagaggaccaaggagaagccaaagaacgggaggccctgcgcggggcggtgttgaatggt
ggaatgccgtccaacagaatagcagcagagttctccaaatgggccagtgatgagatgccc
tccacgagcaatggcgagagcagcaagcagcagctgcctcaggaccccaacgccgcctgc
tcaacctccaacgcgccccggacctgtaaaaacagcgaaatagagaagatcacagagggc
tcgaaagccaccacgtttgaagcactaaaggctcgtatccgggaactggagaaacagatc
cttcgaggggacagatataagtgtctcatctgcatggactcgtacacgatgcccctcacc
tccatccagtgctggcacgtccactgtgaggaatgctggctcaggactctgggaaataag
aaactgtgcccacaatgcaacaccatcacatcgccaggagatctaaggcgcgtctacttg
tga
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