Salvelinus sp. IW2-2015 (Arctic char): 111979184
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Entry
111979184 CDS
T05762
Name
(RefSeq) nuclear receptor coactivator 2 isoform X1
KO
K11255
nuclear receptor coactivator 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111979184
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
111979184
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NCOA
PAS_11
DUF1518
SRC-1
Nuc_rec_co-act
NCOA_u2
DUF4927
PAS
PAS_3
PAS_9
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
111979184
NCBI-ProteinID:
XP_023865305
LinkDB
All DBs
Position
LG19:complement(23687236..23758230)
Genome browser
AA seq
1524 aa
AA seq
DB search
MSSAGDNTPDPAARGESLKRKECGPDLLGPSPKRSTEKPNREHENKYIEELAELIFANIN
DIDNFNVKPDKCAILKETVKQIRQIKEQEKTTTANAEEVQKAHVSSTGQSVIDKDALGPM
MLEALDGFFFVVNMEGNIVFVSENVTQYLQYNQEELMNTSVYSVLHVGDHAEFIKNLLPK
SLVNCRAPRSSENPNRNSHTFNCRMMINPHGPWEGGEQEPQDQEVQQKYETMQCFAVSEP
KSIKEEGEDFQSCLICVARRVPVKERPMLPTYESFTTRQDLQGKITSLDTSLLRASMKPG
WEDLVRRCIQMFHLQNDGEMSFAKKHQQEVLRQGHAFSPLYRFSLSDGTIVSAHTKSKLV
RSPATNEPQLYMSLHILQREQTMCGMNPDMSAQGQGMGKQPMNTVSSLTPPSVGGLSPGL
GGQDTMVGSNTNMATTGGRYRCQGAMNRSPTPRGSSNYALKMGMSSPSQGSPSVTSQGGQ
GGGGTMLSPRHRQSPSVAGCPHVVPTGPFSPTGSLHSPLGVCNSTGVGNNHSVYTGNSSL
NALQALSECHGVSQQGQSIGSPDRKPGNMLQMQSPPGSGGASSTSNPNLNSSQLANRSSC
TSEIEMFGAYGEQSQPDGEERENVEQKKSKDDTLKPFGGSGGELTEAQNRLLNSKGHTKL
LQLLTNKSEHMEPCSPHGAPGGGEPNCKDPVMGPGGHNNHSTSLKEKHKILHRLLQNSTS
PVELAKLTAEATGKELGQGQQDQGGPDCMAATMAEMATKQEPTSPKKKDNALLRYLLDKD
DNTMQEKGIKIEPGTEMKLANVKTEKHDPGYNMADQSSVLEDILDDLQCRQQQQFFSGQH
HQQSRPVSLPANVDKQSIINDILQMTENNSSPTGTNTQQKAFPGMGPGHFNGPRMGQVGQ
RPPVRSMSLDQSNMSAHGSPRSFPPPRNSSPYSVMQQQAMMGNHGMLQNQVNMGNPGLPQ
ASMQQGWGPQGPMGQALQQRMGPDGRMVPNISAGVPMRPSNQQPGLRQMVPMQMMGNVQS
DMEMAGPPYPGQQAPPNQTAPWPDRMMSVDHGPYGNQNRQAYGNPQDEVLCSPLRPGEGP
SDGDALLSQLYSVLKDFDGLEEIDRALGIPTLISQGQPVAQEQYASQESPMRKPPMYSQY
PQAGSMAQGNYMSQQDPGFHGMPGQMGQRMGYPMLRLPARPGGPVPAQPNNLRLQLQHRL
QAQLQNRQPMMNQMGVSNMNLPLRPSVPNQGTLNAQMLAQRQREYLSNILRQRQQHVHQR
AMLMRAQGLNTPPNMASAAGAVEPSQSPGMPPGSMGTNPRIPQANPQQFPYPASYGTGVT
SPPPSTSPFPPLSPGLPGAQQLLSPLHSSSISHGSSQMSLANQQGMMGNVGGQFGAVVNP
QMQQHRAFQFPSSGINQQQQDAGFTGATTPQSPLMSPRLSHAQSPMMQQQAQANSSYQPS
SEMNGWPQGNMSGNSMFTQQSQSQQYMPQQSNGGMYTGTNLNIQGVSMASNANGSMNNMN
QVSAGQITMPTGSLSSMEPEQNYC
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgcgggggacaacacccccgaccctgctgccaggggagagtctctgaagcgg
aaagaatgtggcccggacctcctggggcccagccccaagcggagcacggaaaaaccaaac
cgggagcatgaaaacaaatacattgaagaactggcggagttgatctttgcaaacatcaac
gacattgacaacttcaatgtcaagcctgacaaatgtgcaatcttgaaagaaactgtgaag
cagattcgtcaaataaaagagcaggagaaaacaactactgccaatgcagaggaggtacag
aaagcacacgtctcgtcaacaggccaaagtgttattgacaaagacgctcttggaccaatg
atgctcgaggctctggacgggttcttctttgtggtgaacatggaggggaacattgtgttt
gtgtcggagaacgtgacccagtacctgcagtataaccaggaggagctgatgaacaccagc
gtrtacagcgtcctgcacgtaggagaccacgcagagttcatcaagaacctgctgcccaag
tccctggtgaactgcagagcaccgcggtccagtgagaaccccaacaggaatagccacacg
tttaactgccgcatgatgatcaacccccacgggccctgggagggaggtgagcaggagccc
caggaccaggaggtgcagcagaagtatgagaccatgcagtgtttcgccgtgtccgagcca
aagtccatcaaagaggagggcgaagatttccagtcttgcctgatctgtgtagcacgaagg
gttcctgtcaaagagaggcccatgctcccaacgtacgagagctttaccacaaggcaggat
ctccaaggtaagatcacgtcgctggacaccagtctgctgagagcctccatgaagccaggc
tgggaggacctggtcaggaggtgcatccaaatgttccacctgcagaacgacggggagatg
tcatttgccaaaaagcatcaacaagaagtcctgagacagggccatgcgttcagccctctg
tatcgcttctccctgtccgacggtaccattgtgtcggcccacaccaagagcaagctggtg
cgctcccctgccaccaacgaacctcagctctacatgtccctccacatcctccagagggag
cagacaatgtgtgggatgaacccagacatgtctgcccagggacaggggatggggaagcag
ccaatgaacactgtgtcttcactgactcctcccagtgtgggtgggctgtcaccagggttg
gggggacaggacacaatggttggcagcaataccaacatggccaccacgggtgggcgttac
agatgccagggggctatgaaccgttctcccactcctcggggtagcagcaactatgcactc
aagatggggatgagcagcccgtcgcagggcagtcccagtgtgacctctcaggggggtcaa
ggtggcggtggtaccatgctgtccccacgccaccgccagagccccagtgtggcgggttgc
ccccacgttgttcccacaggacccttctccccgacaggcagcctgcactctccactaggg
gtgtgtaacagcacaggggtggggaacaaccacagtgtctacactggtaacagctccctc
aatgcacttcaggccctcagcgaatgccacggggtctcccagcaggggcagtccataggg
tcacctgacaggaagccaggcaacatgctgcagatgcagagtccccctggtagtggtgga
gctagcagcactagtaaccccaacctcaactccagccagctggccaaccgcagcagctgc
acgtctgagatagagatgtttggagcgtacggggagcagtcccagccagacggggaggag
agggagaacgtggaacagaagaagtcgaaagatgacaccctcaagccttttggaggatca
ggaggagagctgaccgaggcccagaacaggctcctcaacagtaagggccacaccaagctc
ctgcagctactcaccaacaagtcagagcacatggagccctgctcgccccacggggcccct
gggggaggcgagcccaactgtaaggatcccgtgatgggaccagggggccacaacaaccac
tccacctcgctgaaggagaaacacaagatcctccatagactcctccagaacagcacgtcc
ccggtggagctggccaagctgacggctgaggccacggggaaggagctgggtcagggccag
caggaccagggaggaccagactgtatggctgccaccatggctgagatggccaccaagcag
gagcccaccagccccaagaagaaggacaacgctctgctgcgctacctcctggacaaggac
gacaacaccatgcaggagaaaggcatcaagattgagcccgggacagagatgaagctggcc
aatgtgaagactgagaagcacgacccgggatacaacatggcagaccagtctagtgtgctg
gaagacatcttggatgatctgcagtgtcgccagcagcagcagttcttctcaggccagcac
caccagcagtccagacccgtgtctctgcccgccaacgtagacaagcagtccatcatcaac
gacatcctgcagatgacagagaacaacagcagtcccacgggcaccaacacccagcagaag
gccttcccaggtatgggcccaggacacttcaatggtcccaggatgggtcaggtaggccaa
cggccccctgtccgcagtatgtccctggatcagtccaacatgtctgcccatggttctccc
cgatccttccctcctcccaggaacagcagcccctactctgtcatgcagcagcaagccatg
atgggaaaccacggaatgctgcagaaccaggttaacatgggcaacccaggcttgccccag
gctagcatgcagcagggttggggtcctcaggggccaatgggccaggctctgcagcagaga
atggggcctgatggtcgcatggtgcccaacatctcagctggagtccccatgaggcccagt
aaccagcagcctggactcagacagatggtcccaatgcagatgatgggaaacgtgcaatca
gatatggagatggctggtcctccctacccaggacagcaggcaccgcccaatcagacagcc
ccgtggcctgaccgcatgatgtcagtggatcacgggccttatgggaaccagaaccgacag
gcttatggtaacccccaggatgaggtactgtgttctcccttgcggcctggggagggtcct
tcggacggggatgccctgctcagccagctctactcagtgctgaaagactttgacggcctg
gaggagattgaccgcgccctgggaatccccactctgattagtcagggccagccagtggcg
caggagcagtatgccagtcaggagtcacccatgaggaagccacccatgtatagccagtac
ccccaggctggtagcatggcacagggcaactacatgagccagcaggaccctggcttccac
ggtatgcccggtcagatgggccagcggatggggtaccccatgctccgactccctgcccga
ccaggaggcccggtgcctgcccagcccaacaacctgaggctgcagctgcagcaccgacta
caggcacagctgcagaatcgtcagccaatgatgaatcagatgggtgtgtccaacatgaac
ctacctctcagacccagtgtacctaaccagggaaccctgaatgctcagatgttggcccag
agacagagggagtacctgagtaacatcctgcgccagcgccagcagcacgtccaccagaga
gccatgctgatgcgggcccaaggcctcaacaccccccccaacatggcttcagcggctggg
gcagtggagccctcacagtcccctggcatgccccccggttccatgggcaccaaccctcgg
atcccccaagcaaacccccagcagttcccctacccggccagctacggtactggtgttacg
tccccgccaccctccaccagccccttccccccgctgtcccctggtctccctggggctcag
cagctcctctcccctctccactcctcctcaatctcacatggctcctcccagatgagtcta
gctaaccagcaagggatgatgggaaacgtaggtggccagtttggagccgtagtgaatcca
caaatgcagcaacaccgtgccttccagtttcccagctcaggtataaaccagcagcagcag
gacgcaggcttcacaggagccaccaccccccagagccccctcatgtccccccgcytgagt
cacgcccagagccccatgatgcaacagcaggcccaggccaactcctcctaccagccctcc
tctgagatgaacggctggcctcagggcaacatgtcaggaaacagcatgttcacacaacag
tctcaatctcagcagtacatgccccaacagtctaatggtggaatgtacaccggcacaaac
ctgaacatacagggtgtctccatggcctccaacgccaacggcagcatgaacaacatgaac
caagtgtcagcaggccagatcaccatgcctacaggaagcctgtcttccatggagcctgag
cagaactattgctga
DBGET
integrated database retrieval system
