Salvelinus sp. IW2-2015 (Arctic char): 111979207
Help
Entry
111979207 CDS
T05762
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111979207
Spliceosome [BR:
salp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111979207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
111979207
NCBI-ProteinID:
XP_023865356
LinkDB
All DBs
Position
LG19:28788400..28797751
Genome browser
AA seq
547 aa
AA seq
DB search
MESIVSDVAVGMKRGSDDLNLYSTSPNSVTDNGNDSSKKLRVEDRMESPPSRVLHIRKLP
SEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVMPQVRNVPVF
IQFSNHKELKTDSTLNQRAQAVLQAVSAVQDGGSPNSDNSTLDSVLAHAPSPVLRIIIDN
MFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQARLSLDGQNIYNSC
CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPTVDPAMCAAYNKDSSLLGTPSGM
GAPYSNGGGFQSSLSLSQGGGAINPMSAAAAAAAAAGRMALSGHSGCSGVLLVSNLNEEM
VTPQSLFTLFGVYGDAQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTL
SKHQAVQLPREGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNVPFGLDRE
DVTEEDLRLLFSNAGGIVKAFKFFQGHKMALLQMSTVEEAIQALMDLHNYDMGSNHHLKV
SFSKSTI
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcattgtcagtgatgttgcagttggcatgaagagaggctcagatgatttgaat
ctctacagcaccagccctaactctgtgactgataacggcaatgacagcagtaagaaactg
agagtggaggacaggatggagagtcccccttcccgcgtgctccacatcaggaagttgccc
agcgaggtgtcagagacagaggtcatcgccctgggcctaccattcggcaaggtcaccaac
atcctcatgctgaaaggaaaaaatcaggcgttcctggagttgggtacggaggaggcggct
gttaccatggtgaactactacacggcggtgatgcctcaggtccgcaacgtccccgtgttc
atccagttctctaaccacaaggagctgaagacagacagcactctcaaccagcgcgcacag
gctgtcctccaggccgtgtcggcagtgcaggatggtggctctcccaactctgacaacagt
acgctggacagtgttctagcccatgcccccagccctgtgctcaggataatcatcgacaac
atgttctaccccgtcactctggacgtcctccagcagatcttctccaagtttggaacagtc
atgaagatcatcacgttcaccaagaacaaccagttccaggccctgctccagttcagcgaa
ccagtcaacgcccagcaagccagactgtccctggacggccagaacatctacaattcctgc
tgcacgctgcggatcgacttctccaagctggtcaacctgaacgtcaagtacaacaatgac
aagagccgggactacacccggcccgagctccctgccggcgacggccagcccacagtagac
cctgccatgtgcgccgcctataacaaggactcctccctgctcggtaccccctctggaatg
ggagcgccatactctaatggtggagggtttcagtcttctctctccctctcgcagggcgga
ggagccatcaatccaatgagtgctgcggctgcggcggcggcggctgcagggaggatggcg
ctctccggacactccggctgcagcggcgtgctcctggtcagcaacctgaacgaagagatg
gttacgccccaaagtctgtttaccctcttcggggtgtacggtgatgctcagcgcgtgaag
atcctctacaataagaaggacagtgctcttatccagatgtcggacgggaaccaggcccag
ctcgcgatgagccacctgaatggccagaagatgtacgggaagatcatccgtgtgacgctt
tccaagcaccaggcagtgcagctgcccagggaagggctggatgaccagggcctaaccaag
gacttcaccaactccccactgcaccggttcaagaagcccggctccaagaactttcagaac
atcttccctccttccgccacgctccacctctccaacgtccctttcggacttgacagggag
gatgtgacggaggaggatctgcgactgctgttctctaatgctggtggcattgtgaaggcc
ttcaagtttttccaaggccacaaaatggcgctactccagatgtccacggtggaggaggcc
atccaggccttaatggacctccacaactacgacatgggcagcaaccaccacctgaaggtc
tccttctccaagtccaccatctag
DBGET
integrated database retrieval system
