Salvelinus sp. IW2-2015 (Arctic char): 111979265
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Entry
111979265 CDS
T05762
Name
(RefSeq) cullin-1
KO
K03347
cullin 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04110
Cell cycle
salp04114
Oocyte meiosis
salp04120
Ubiquitin mediated proteolysis
salp04141
Protein processing in endoplasmic reticulum
salp04310
Wnt signaling pathway
salp04340
Hedgehog signaling pathway
salp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111979265
04120 Ubiquitin mediated proteolysis
111979265
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111979265
04340 Hedgehog signaling pathway
111979265
04350 TGF-beta signaling pathway
111979265
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111979265
04114 Oocyte meiosis
111979265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111979265
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
111979265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
IntS11_C
Motif
Other DBs
NCBI-GeneID:
111979265
NCBI-ProteinID:
XP_023865454
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Position
LG19:complement(19388164..19401835)
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AA seq
777 aa
AA seq
DB search
MSSNRSQNPHGLKQIGLDQIWDDLRAGIQQVYTRQSMAKARYMELYTHVYNYCTSVHQSN
QARGAGPPPSRPSKKAPTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFY
TQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQV
TNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLSVYKEYFETQFLAD
TERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH
LEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIYNQGLAAIEKCGEAA
LNDPKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMVQSSSKSP
ELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS
ASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQV
LSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYHLSKGELVTNCFKNRY
TLQASTFQMAILLQYNTEDVYTVQQLTDSTQIKIDILVQVLQILLKSKLLVLEDENANVD
EVEFKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIM
KMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaacagaagccagaaccctcatgggctcaaacagattggcctagaccagatc
tgggacgacctgcgagcaggaatacagcaggtgtacaccagacagagcatggccaaagca
cgatacatggaactctacacacatgtttataactactgtaccagtgtgcaccagtccaat
caggcccgtggggcaggscccccgccatccaggccctctaaaaaggcccccaccccagga
ggggcccagtttgtgggcctggagctctacaagagactcaaggaattcctcaagaactac
ctgaccaacctgctcaaggatggagaagacctgatggatgagagtgtattaaagttctac
acacaacagtgggaagactacagattctccagcaaagtgctgaatggtatctgtgcctac
ctcaaccggcactgggtccgccgcgagtgtgatgaggggcgcaaagggatctatgaaatc
tactccctcgctttggtgacatggagggaatgccttttcagacctttgaataaacaagtc
acaaatgctgtattgaagctcatcgagaaggaacgtaacggagagaccatcaacaccagg
cttatcagtggagtcgtccaatcctatgttgagttgggcctcaatgaggatgatgccttt
gccaaaggccccacattgtcggtctacaaagagtactttgagactcagttcttggcggac
accgagcgcttctacacacgagagagcacagagttcctgcaacaaaaccctgttactgag
tacatgaagaaggcggaggcacgtcttttggaggagcagcggagggtgcaggtgtacctc
catgagagcacgcaggacgagctggcccgcaagtgtgagcaggtgctcatcgagaagcac
ctggagattttccatacagagttccaaaatcttctggacgctgacaaaaatgaagacctt
gggcggatgtacaatttggtgtcccgaatcactgatgggttgggagagctgaagaaactc
ctggagacgcacatatacaaccagggccttgctgctatagagaagtgtggagaagcggct
ctcaatgatcccaaaatgtatgtccagaccatcttagacgtccacaaaaagtataatgct
ttagtaatgtcagcgttcaacaacgacgctggttttgttgctgctctagacaaggcctgt
ggacgcttcataaacaacaatgctgtgaccaagatggtgcagtcgtccagcaaatcccca
gagctgctggctagatactgtgattctttgttgaagaagagctcaaagaacccagaggag
gcagagctggaagacacactaaaccaagtgatggtggtctttaagtacatagaggacaaa
gatgtgttccagaagttctacgccaagatgctggctaagcggttagtccatcagaacagc
gccagtgacgatgctgaagccagtatgatctccaaactgaagcaagcgtgtggcttcgag
tacacctctaaactccagcgcatgttccaggacatcggcgtcagcaaagacctaaatgaa
caattcaaaaagcacctcaccaactctgagcctttggacttggacttcagcatccaggtc
ctcagttctggttcctggcccttccagcagtcctgtacattcgcattgccctctgagctg
gagaggagttaccaaaggttcacggccttctacgccagcagacacagcgggcgcaagctg
acctggctctaccacctgtccaaaggagagctggtcaccaactgctttaaaaacagatac
actctacaggcttctaccttccagatggccatcttactacaatacaacactgaggatgtc
tacacagtgcagcagctcactgacagcacgcagatcaagatagacattttggtgcaagtg
ttgcaaatcttgttgaagtccaaattgctggtcctggaggatgagaacgcaaatgtggat
gaagtggagttcaaaccagacaccttaataaaactcttcctgggatacaaaaacaagaaa
cttcgggtgaacattaacgtgccaatgaagacagagcaaaagcaggagcaggaaaccact
cacaagaacatagaggaggacaggaaactgctaatacaggcagccatcgtgagaatcatg
aagatgcgtaaagtgctgaaacatcagcagctcctggcagaggttctgaaccagctgtca
tccaggtttaaaccaagagtccccgtcatcaagaaatgcatcgacatcctgatagagaag
gagtacctggagcgtgtcgacggagagaaagacacttacagctacttggcttaa
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