Salvelinus sp. IW2-2015 (Arctic char): 111979356
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Entry
111979356 CDS
T05762
Name
(RefSeq) deubiquitinating protein VCIP135-like
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111979356
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111979356
Enzymes [BR:
salp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111979356
Peptidases and inhibitors [BR:
salp01002
]
Cysteine peptidases
Family C64
111979356
Ubiquitin system [BR:
salp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
111979356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
111979356
NCBI-ProteinID:
XP_023865614
LinkDB
All DBs
Position
LG19:complement(23583584..23590782)
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AA seq
1190 aa
AA seq
DB search
MSLLQGSKKKDKRILSGTCPDPKCQARLFFPAYGSISIECTECGQRHEQNNLLNVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPILTRYGMDKQTGKAKLLR
EMNQGEMFDCSLLGDRAFLIEHEHVSTVGYGKDRSGSLIYLHDTLEEIKKANSNKECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRDNLKQNFKQNLDRYKALFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVPEE
QCKGKDGKFNKPICIAWSSSGRNHYIPLVGIKNTLLPKLPPRLLPKAWGVPQELIKKYIN
LEQDGSCVIAGDRSLQDKYVMRLVNAMEEIFMEKHGIHPSLVADVHQYVYRRTGMIGVQP
EEVTEAAKKSVMENRLHRCLICNALSELHVLPEWLAPSGKLYNLAKSTHGQLRPDKNYSF
PLNNVVCSYDPEKDILIPDYKLSTLNTCNWCHGTSVRHIHGNGSVVYLDGDRTNTRSQGG
KCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYEVEVSLNSNVYDVAMKLV
TKHFPGEFGSELLVQKVVNTILHHTAKKNPDEYNPVSIDGAHAQRLTDVVETQQAVDTQP
PTKIILTGQKSKTIHKEELTMSKAERSLQQSISEQALVTQKRRTDRLKQEQKGVQGHGRP
SSPSAAQEPSSSAPATPTKSSFSPTSSKEKKIRVTTSDGRQAMLTLQAQTTFSELQRSIA
NEFIVSPAQQCIRHGFPPKELLPPKDGEENEPVALQHGDRVTVEILRGPEDHKVSAPSAS
SSHSSLHSLHSVKSDDPVTSSRMNTSRELQENIDLEMSSLCLLATLMGEEVWSYAKKLPH
LFQQGGVFFNIVKKDMGLMDGKHCTLPHLTGKTFVYNAAEECLELCVDAAGHFPVGPDVE
DLVKEALVQLRSEASSRSREGSPSHSLLRLGSGGVVRKKEQLQSVNAFQGKGHSLGSAPG
GSPPEHKPITRQHSSGVDLSSSVSKGPDLSDISEDATKELVRMAPGFVTMKDSRHLDPSM
IEEQRKKLQEMVSSIQASMDRHLREQSNAGAGTGGPAERTSGPKMSASQSAPEVGDQEAS
SMDVSTAGAHGTPVKAGNKPDGKDAGSEELEEMDSQDAEHTNALEPMDHS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgctacaaggctcaaagaaaaaggacaagcgtattttgtccggtacctgccca
gacccgaaatgccaggcgaggctattcttccctgcttacggctcgatcagcattgaatgc
actgaatgtggccaacgccacgaacagaataatcttttaaacgtggaagaagtaactgat
ccagacgttgtactgcacaatttgttaagaaatgccctactcggtgtcactggagcccca
aagaagggaaccgagctggtgaaagtgatggggctttccaactaccattgcaagctcctc
tctcctattctcacaaggtatggaatggataagcagacgggaaaagcgaaactgctgagg
gaaatgaatcaaggagagatgttcgactgctcacttctaggtgatcgggcgtttctaatc
gaacatgagcatgtatctacagttggctatggcaaggacagatccgggagcctgatatac
cttcacgacactttggaggagattaagaaagctaacagcaacaaagaatgcttaattcct
gttcatgtggatggagatggacattgccttgttcatgctgtgtccagggccctggtaggc
agagaactgttctggcatgccttaagagayaatttgaaacagaatttcaagcaaaatctg
gatcgctacaaggcactctttcaggattttattgatgcagctgaatgggaggacatcatc
aacgaatgtgaccccctttttatcccaccggagggtgtgccactgggacttcgaaacatt
cacatatttggcttggctaatgtgctgcaccgccccataatcttgttagattcactgagt
ggaatgaggagctctggggattactctgcaacttttctccctgggcttgtaccggaagag
cagtgcaagggaaaagatggaaagttcaacaagcctatatgcatcgcctggagtagctct
gggcgtaaccactacatccctcttgtcggaataaaaaacaccctccttcccaaactgccg
ccaaggcttctccccaaagcttggggggtcccgcaggagctcatcaagaagtacattaat
ttggagcaagacgggagctgcgtcatcgcgggagacaggagcttacaagacaagtatgtg
atgagactggtcaatgccatggaggagatcttcatggagaagcatggaatccacccctcc
ctggtggcagacgtgcatcagtacgtttacagacggaccggtatgatcggcgtccaaccc
gaagaggtgacggaggctgccaagaaatcagtcatggaaaaccggctacatcgctgtctg
atctgcaatgcactctctgagcttcatgttctacctgagtggctggctccaagtggtaag
ctctacaacctggctaaatccacccacgggcagctcagacccgacaagaactacagcttt
ccgttgaacaatgtggtctgctcttacgaccccgagaaagacatcctcattcctgactac
aaactaagcaccttgaacacctgcaactggtgccacggcacctcagtgcggcacatccat
ggcaacggctctgtggtgtacttagatggagacagaaccaacacccgctcccaggggggg
aagtgcggctgcggcttcaagcactactgggagggaaaggagtacgacaatctgccagag
gctttccccatcactctggagtggggtgggcgtgtcgtgagggagacagtgtactggttc
cagtatgaggttgaggtgagcctgaacagcaacgtctatgatgttgccatgaaactggtt
accaagcatttccctggggagtttgggagtgagctcctagtgcagaaagtggtgaacacc
attttgcatcacactgccaagaagaacccagatgagtataacccagtctccattgacggt
gcgcatgctcagagactcacagacgtggtggaaacccagcaggctgttgacacacagcca
ccgactaagatcatactaactgggcagaaatcaaagaccattcataaagaggagctgacc
atgagtaaagcagagcggagcctccagcagagcatcagcgaacaggccctagtgacccag
aaaaggaggacagatcgactaaagcaggagcagaagggagtccagggacatgggcggccg
tcctctccgagtgctgctcaggaaccttcctcctccgctccagccacgcccaccaaatct
tccttctcccccacttccagtaaggagaagaagatccgtgtcaccactagcgacgggcgg
caggccatgctcactctacaggctcaaaccaccttttctgagctccagaggagcattgcg
aacgagttcattgtgtctccagcccagcaatgtattcgacatgggtttccccccaaagaa
cttttgcctcccaaggatggagaggagaatgagcctgtggctctccaacatggggacagg
gtgactgtggagatcctgagaggtccagaggatcacaaggtttctgccccaagtgcttcc
agttcccattcatcccttcattccctccactctgtgaagagtgatgatccagtgacttcc
agcagaatgaatactagcagagagctacaggagaacattgaccttgagatgtcctctctc
tgtctcctagcaaccttaatgggagaagaagtctggtcatatgcaaaaaaactgcctcac
ttattccagcaaggtggagttttcttcaacattgtgaagaaagatatgggcctgatggat
ggcaagcactgcaccctcccacacttgactggaaagacgtttgtgtacaacgcagcagag
gagtgtctggagctgtgtgtggatgcagcggggcacttccccgtgggccctgacgtggag
gacctcgtcaaggaggccctggtgcagctccgctctgaggcttcctccaggagtcgggag
ggaagcccctctcacagcctgctgaggctcggaagtggaggtgtggtgcgcaagaaggag
cagctccagagtgtcaatgccttccaaggtaagggccactccctgggcagtgccccaggc
ggctctccccctgaacacaagcccatcacccgccagcacagcagcggggtggacctgagc
tccagcgtctcgaagggacccgacctctctgacatctcagaagatgcaaccaaggagctg
gtgcgcatggctcctggtttcgtcaccatgaaagacagccgacacctagaccctagtatg
atcgaagaacagaggaaaaaactacaggagatggtctcatccatccaagcctccatggac
aggcacctgagggagcagagcaatgcaggggcaggcactgggggccctgcagagaggaca
agtgggcctaagatgagtgcttcccaatctgccccagaggtaggtgaccaggaagcctct
tctatggacgtatctactgctggtgctcatggcacaccagtgaaggcagggaacaagcct
gatggaaaggatgcagggtcagaggagctggaggaaatggatagccaggatgcagagcat
accaacgccctggagccgatggatcattcctga
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integrated database retrieval system
