Salvelinus sp. IW2-2015 (Arctic char): 111979376
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Entry
111979376 CDS
T05762
Name
(RefSeq) transcriptional repressor p66 alpha isoform X1
KO
K23194
transcriptional repressor p66
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111979376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111979376
03036 Chromosome and associated proteins [BR:
salp03036
]
111979376
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
111979376
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
111979376
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
DUF7573
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
111979376
NCBI-ProteinID:
XP_023865635
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Position
LG19:3671235..3716229
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AA seq
773 aa
AA seq
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MSEEAVRQTRSQKRALWREVPPTESDCKKPKLDRAETGAPDQDDESSTKPEPQPETTKDD
LDQFKHVVKPEKAPELPKLKLSLVLPSQPAKDPERDWAPKWSDPSLDNRTERNDHSDQVR
VKSEVPLDGRNRTVKSEPMVASGMMTATEVKATIKVEVQTREQALDMSTSRGTLMREKCP
LSPDDDVIVLSDNDSCSPPMNGLNHLKELDTDLLMKTSPEDRDRIIKQLKGELRQEEAKL
VLLKKLRQSQTQKDTLQKVWTHVAKPSVSSGSAAPPSLIRGSITASKGSQQVGSSRSSGT
VIPPPLVRGGQQISSKHGPHNSQIIMPPLVRGAQPIAVSPQQIQSLRQQQQQQLSGSGSG
GSGPPPLLLASRANVPGTQAQRGLMQSGLIRVGNINNASLLVNISQASPTNMKVPSMTSQ
SGNSSVSVVNVNGSPAACQAAAKLALRKQLEKTLLEIPPPKLPTPELNFLPSAANNEFIY
LVGLEDVVQNLLDSMMRAKTGKPPVKPAIKEPFTCTQCSTDFTCRWRQDKAKGGTILCAD
CMSSNQKKALKAEHTNRLKAAFVKALQQEQEIEQQILRQAASPVSHTPSSSFSSSSTSPS
VKAEHLVSQQLKQAQAQARASSLHHQHHHQQHNRGQSIARHHSTNIKQGQLSRGGVPSVG
VGVRGVSHSFSSSSQLQSAVAAAGLVSRPGKHAHVRSTAQGSKGSSSGNSSSGSAQATAW
RKQNNINTGVTMAYVNPSLPVHKTSSTVDARQREYLLDMIPSRSISQAANTWK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaggctgttcgccagacgcgcagtcagaagagggcgctatggagagaagtc
cctcccactgagtctgactgcaagaagcccaaactagaccgggcagagactggagctcca
gaccaggatgatgagagctcaactaaaccggaaccacaacccgaaaccacaaaagatgac
ctagaccagtttaaacatgtggtcaagcctgagaaggcaccagaactacccaagttaaaa
ttatcgctagtgttaccatctcaaccagcaaaggacccagagcgggactgggccccgaaa
tggtcagatccgagcttagacaaccggactgagaggaatgaccacagcgaccaggtcagg
gtgaaaagtgaggtgcctctagatgggcggaacaggaccgtgaagtcggaaccgatggtg
gctagtggtatgatgacggcaacggaggtgaaggctaccattaaagttgaggtccagaca
agagagcaggcgctggacatgagcacctcgagaggcaccttaatgagggagaagtgtccc
ctgtccccagacgatgatgtcattgtcctgtcggataatgactcctgcagtccgccgatg
aacggcttgaaccacctcaaggagctggacacagacctacttatgaagaccagtccagag
gacagggatcgcatcataaagcagttgaaaggggagctgaggcaggaggaggccaagctg
gtgctgctgaagaaactacgacagagccagacacagaaggacacactgcagaaggtatgg
acgcatgtagccaagccctcagtatcgtcaggttctgcagctcctccatctctgatccgg
ggatccattacagccagcaaaggctcccagcaggtggggtcaagtaggagttcaggcaca
gtcattccacctcctctggtgaggggcgggcagcagatctcctccaaacatggcccccac
aactcccagatcatcatgccacccctggttagaggggcacagccaatcgctgtgtctcct
cagcagatccagtctctccggcagcagcaacagcagcaactgtcagggtctggctctgga
ggctctggcccccctcccctgctgctggcctccagggccaacgtacccggcacccaggcc
cagagaggcctcatgcagtctggcctcatcagggtgggaaacatcaacaatgccagcctg
cttgtcaacatctcacaggcctccccaactaacatgaaggtgccttctatgacctcccag
tctggaaacagcagtgtgtctgtggtcaacgtgaacggctctcctgccgcctgtcaggcc
gcagctaagctagccctgcgtaagcagctggagaagacccttctggagattcctcctccc
aaacttcccaccccagagctaaacttcctgccctcggcagccaacaacgagttcatctac
ctggtgggcctggaggatgtggttcagaacctgctggactccatgatgagagctaaaaca
gggaagcccccggtcaagcccgccatcaaagagcccttcacctgcacccagtgcagcacc
gattttacctgccgttggaggcaagacaaggccaagggcgggaccatcctctgtgcagat
tgcatgtcttccaatcagaagaaggccctgaaggccgagcacaccaataggctgaaggct
gcgtttgtcaaggccctgcagcaggagcaggagatagagcagcagatcctccggcaggct
gcctcccctgtctctcacaccccctcctcctctttctcctcctcatccacctctccgtcg
gtgaaggcggagcatctagtgtcccagcagctgaaacaggctcaggcccaggctagggcc
tcctctctgcatcaccagcaccatcaccaacagcacaacagaggacagagcattgcacgc
caccactccaccaacatcaaacagggccagctctcccgtggcggtgtcccgtctgtgggg
gtgggggtgaggggcgtgtcccactctttctcctcctcctctcagctgcagagtgcagtg
gccgctgcaggcttggtcagccggccaggtaagcatgcccatgtgcgctcgactgcccag
ggttcaaagggcagctccagtgggaacagcagcagtggtagcgcccaagccactgcatgg
aggaagcagaacaacatcaacacaggtgtgaccatggcctatgtgaaccccagcctgcca
gtccataagacctcatccacagtggacgcccgtcagagagagtacctcctggacatgatc
ccctcacgctccatctcccaggcagctaacacgtggaaataa
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